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Answer: Answer: UMAP graph using DimPlot pre/post integration
8 months ago by fracarb8 ★ 1.6k
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1
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891
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Comment: Comment: Optimal number of features to use when integrate multi samples by Seurat in sc
8 months ago by fracarb8 ★ 1.6k
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1.6k
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Comment: Comment: Negative Expression in RNA Assay on Dot Plot After SCT Transform
8 months ago by fracarb8 ★ 1.6k
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1
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1.6k
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Answer: Answer: Negative Expression in RNA Assay on Dot Plot After SCT Transform
8 months ago by fracarb8 ★ 1.6k
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2.5k
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Answer: Answer: InferCNV results interpretation
8 months ago by fracarb8 ★ 1.6k
1
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984
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Answer: Answer: Can I using scVI to integrate data, then using R to conduct following analysis?
8 months ago by fracarb8 ★ 1.6k
1
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1.5k
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Answer: Answer: Change transparency/alpha in seurat's vlnPlot()
9 months ago by fracarb8 ★ 1.6k
1
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0
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559
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Answer: Answer: HeatMap, R, Rownames
10 months ago by fracarb8 ★ 1.6k
0
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1
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826
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Answer: Answer: How to obtain cell-cell interaction list
10 months ago by fracarb8 ★ 1.6k
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0
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994
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Comment: Comment: Housekeeping genes scRNA seq
10 months ago by fracarb8 ★ 1.6k
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2
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1.6k
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Comment: Comment: scrna seq analysis - doublets
10 months ago by fracarb8 ★ 1.6k
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1
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2.4k
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Answer: Answer: In Scanpy, how to RDS file and merge it with other Scanpy objects.
10 months ago by fracarb8 ★ 1.6k
7
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5.4k
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Answer: Answer: Convert Human to Mouse Symbols
10 months ago by fracarb8 ★ 1.6k
0
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0
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784
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Answer: Answer: Uploading 10x Data into R for Monocle 3
10 months ago by fracarb8 ★ 1.6k
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0
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689
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Answer: Answer: What kind of statistical test does Cellranger count use?
11 months ago by fracarb8 ★ 1.6k
0
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0
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905
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Comment: Comment: How to introduce normalized and scaled seurat data into monocle 3?
11 months ago by fracarb8 ★ 1.6k
2
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4.0k
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Answer: Answer: Seurat 'DoHeatmap()' hierarchical clustering
11 months ago by fracarb8 ★ 1.6k
0
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0
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968
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Comment: Comment: Seurat PlotClusterTree together with heatmap of gene expression
12 months ago by fracarb8 ★ 1.6k
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596
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Comment: Comment: Remove string from Seurat Object
12 months ago by fracarb8 ★ 1.6k
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0
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20k
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Comment: Comment: How to get subset of a Seurat object based on metadata?
13 months ago by fracarb8 ★ 1.6k
0
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1
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20k
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Answer: Answer: How to get subset of a Seurat object based on metadata?
13 months ago by fracarb8 ★ 1.6k
1
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1.2k
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Comment: Comment: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
14 months ago by fracarb8 ★ 1.6k
0
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1
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1.2k
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Answer: Answer: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
14 months ago by fracarb8 ★ 1.6k
0
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1
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2.1k
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Comment: Comment: How to solve a possible memory issues with Seurat and IntegrateData step?
14 months ago by fracarb8 ★ 1.6k
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1
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2.1k
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Answer: Answer: How to solve a possible memory issues with Seurat and IntegrateData step?
14 months ago by fracarb8 ★ 1.6k
0
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1
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1.1k
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Comment: Comment: How to use ClusterProfiler
14 months ago by fracarb8 ★ 1.6k
1
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0
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411
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Comment: Comment: Font name used in dittoSeq?
14 months ago by fracarb8 ★ 1.6k
2
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1
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639
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Comment: Comment: R bug during normalize
15 months ago by fracarb8 ★ 1.6k
0
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1
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669
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Answer: Answer: exchange the monocle data with Seurat
15 months ago by fracarb8 ★ 1.6k
1
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0
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755
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Comment: Comment: HLA typing with archasHLA - DNA seq?
15 months ago by fracarb8 ★ 1.6k
1
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0
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863
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Comment: Comment: bash script error to copy files from multiple directories to one directory
16 months ago by fracarb8 ★ 1.6k
2
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1
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863
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Answer: Answer: bash script error to copy files from multiple directories to one directory
16 months ago by fracarb8 ★ 1.6k
1
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0
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567
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Answer: Answer: Extract Monocle2 "State" for Seurat
17 months ago by fracarb8 ★ 1.6k
0
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0
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1.2k
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Comment: Comment: How can I convert -log10 (p-value) to p-value?
17 months ago by fracarb8 ★ 1.6k
0
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0
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824
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Comment: Comment: How to deal with "///" in between gene symbols?
18 months ago by fracarb8 ★ 1.6k
0
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1
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1.7k
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Comment: Comment: Tuning seurat integration strength to prevent overcorrection
19 months ago by fracarb8 ★ 1.6k
0
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1
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1.7k
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Answer: Answer: Tuning seurat integration strength to prevent overcorrection
19 months ago by fracarb8 ★ 1.6k
0
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0
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732
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Answer: Answer: What is the best way to process a metadata file that SEURAT can read?
20 months ago by fracarb8 ★ 1.6k
1
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1
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3.1k
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Answer: Answer: SCTransform and differential gene expression
20 months ago by fracarb8 ★ 1.6k
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0
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2.2k
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Comment: Comment: Any script that can produce different mutations of protein sequences at specifie
20 months ago by fracarb8 ★ 1.6k
0
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2
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2.4k
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Comment: Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
21 months ago by fracarb8 ★ 1.6k
0
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1
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2.4k
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Comment: Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
21 months ago by fracarb8 ★ 1.6k
0
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0
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838
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Comment: Comment: Pearson correlation matrix heat map. The different colors represent Pearson corr
22 months ago by fracarb8 ★ 1.6k
0
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0
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961
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Answer: Answer: Clustered, annotated dotplot to scRNA-Seq data
22 months ago by fracarb8 ★ 1.6k
0
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1
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1.9k
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Comment: Comment: ESTIMATE tumor purity
22 months ago by fracarb8 ★ 1.6k
1
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1
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1.9k
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Answer: Answer: ESTIMATE tumor purity
22 months ago by fracarb8 ★ 1.6k
1
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1
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2.8k
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Answer: Answer: What to do with Seurat metadata and counts in separate text files?
23 months ago by fracarb8 ★ 1.6k
0
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1
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1.1k
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Answer: Answer: How to add Ensembl id to cluster.markers in Seurat
23 months ago by fracarb8 ★ 1.6k
2
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0
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1.1k
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Answer: Answer: Error on R shiny app metaOmics; object %AND% not found
23 months ago by fracarb8 ★ 1.6k
1
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1
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1.1k
views
Comment: Comment: Error on R shiny app metaOmics; object %AND% not found
23 months ago by fracarb8 ★ 1.6k
203 results • Page 2 of 5
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