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241
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Answer: Answer: What kind of statistical test does Cellranger count use?
23 hours ago by fracarb8 ▴ 950
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189
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Comment: Comment: How to introduce normalized and scaled seurat data into monocle 3?
7 days ago by fracarb8 ▴ 950
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285
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Answer: Answer: Seurat 'DoHeatmap()' hierarchical clustering
12 days ago by fracarb8 ▴ 950
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246
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Comment: Comment: Seurat PlotClusterTree together with heatmap of gene expression
4 weeks ago by fracarb8 ▴ 950
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235
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Comment: Comment: Remove string from Seurat Object
7 weeks ago by fracarb8 ▴ 950
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1.6k
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Comment: Comment: How to get subset of a Seurat object based on metadata?
9 weeks ago by fracarb8 ▴ 950
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1.6k
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Answer: Answer: How to get subset of a Seurat object based on metadata?
9 weeks ago by fracarb8 ▴ 950
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455
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Comment: Comment: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
12 weeks ago by fracarb8 ▴ 950
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1
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455
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Answer: Answer: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
12 weeks ago by fracarb8 ▴ 950
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1
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660
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Comment: Comment: How to solve a possible memory issues with Seurat and IntegrateData step?
3 months ago by fracarb8 ▴ 950
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1
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660
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Answer: Answer: How to solve a possible memory issues with Seurat and IntegrateData step?
3 months ago by fracarb8 ▴ 950
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1
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579
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Comment: Comment: How to use ClusterProfiler
3 months ago by fracarb8 ▴ 950
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236
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Comment: Comment: Font name used in dittoSeq?
3 months ago by fracarb8 ▴ 950
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1
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345
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Comment: Comment: R bug during normalize
3 months ago by fracarb8 ▴ 950
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1
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343
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Answer: Answer: exchange the monocle data with Seurat
3 months ago by fracarb8 ▴ 950
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438
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Comment: Comment: HLA typing with archasHLA - DNA seq?
4 months ago by fracarb8 ▴ 950
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420
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Comment: Comment: bash script error to copy files from multiple directories to one directory
5 months ago by fracarb8 ▴ 950
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420
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Answer: Answer: bash script error to copy files from multiple directories to one directory
5 months ago by fracarb8 ▴ 950
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0
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232
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Answer: Answer: Extract Monocle2 "State" for Seurat
6 months ago by fracarb8 ▴ 950
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531
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Comment: Comment: How can I convert -log10 (p-value) to p-value?
6 months ago by fracarb8 ▴ 950
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0
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512
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Comment: Comment: How to deal with "///" in between gene symbols?
7 months ago by fracarb8 ▴ 950
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1
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731
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Comment: Comment: Tuning seurat integration strength to prevent overcorrection
8 months ago by fracarb8 ▴ 950
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1
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731
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Answer: Answer: Tuning seurat integration strength to prevent overcorrection
8 months ago by fracarb8 ▴ 950
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0
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379
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Answer: Answer: What is the best way to process a metadata file that SEURAT can read?
9 months ago by fracarb8 ▴ 950
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1
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1.5k
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Answer: Answer: SCTransform and differential gene expression
9 months ago by fracarb8 ▴ 950
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1.2k
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Comment: Comment: Any script that can produce different mutations of protein sequences at specifie
9 months ago by fracarb8 ▴ 950
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2
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1.4k
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Comment: Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
10 months ago by fracarb8 ▴ 950
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1
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1.4k
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Comment: Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
10 months ago by fracarb8 ▴ 950
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454
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Comment: Comment: Pearson correlation matrix heat map. The different colors represent Pearson corr
11 months ago by fracarb8 ▴ 950
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0
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568
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Answer: Answer: Clustered, annotated dotplot to scRNA-Seq data
11 months ago by fracarb8 ▴ 950
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1
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933
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Comment: Comment: ESTIMATE tumor purity
11 months ago by fracarb8 ▴ 950
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1
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933
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Answer: Answer: ESTIMATE tumor purity
11 months ago by fracarb8 ▴ 950
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1.5k
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Answer: Answer: What to do with Seurat metadata and counts in separate text files?
12 months ago by fracarb8 ▴ 950
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1
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580
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Answer: Answer: How to add Ensembl id to cluster.markers in Seurat
12 months ago by fracarb8 ▴ 950
2
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668
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Answer: Answer: Error on R shiny app metaOmics; object %AND% not found
12 months ago by fracarb8 ▴ 950
1
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1
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668
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Comment: Comment: Error on R shiny app metaOmics; object %AND% not found
12 months ago by fracarb8 ▴ 950
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0
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1.1k
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Answer: Answer: Automatic rename of filenames with bash script
12 months ago by fracarb8 ▴ 950
1
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0
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1.2k
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Comment: Comment: Normalization of RNASeq counts with a reference gene (/genes)
12 months ago by fracarb8 ▴ 950
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1
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323
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Comment: Comment: Content of Rscript gone after updating
12 months ago by fracarb8 ▴ 950
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1
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1.2k
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Answer: Answer: Normalization of RNASeq counts with a reference gene (/genes)
13 months ago by fracarb8 ▴ 950
3
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1
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528
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Answer: Answer: use gene symbol in heatmap instead of ensemble geneID
13 months ago by fracarb8 ▴ 950
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0
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529
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Answer: Answer: How to test for gender bias in RNA seq experiment ?
14 months ago by fracarb8 ▴ 950
2
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0
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265
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Comment: Comment: What does it mean by "conformational space"?
14 months ago by fracarb8 ▴ 950
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0
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547
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Answer: Answer: When looking at a heatmap created by DESeq2, how can I find what genes are in sp
14 months ago by fracarb8 ▴ 950
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0
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1.1k
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Answer: Answer: MAST for scRNA-seq
14 months ago by fracarb8 ▴ 950
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1
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1.3k
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Comment: Comment: Seurat cluster label transfer
14 months ago by fracarb8 ▴ 950
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1
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1.5k
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Comment: Comment: addModuleScore and enrichment score methods
14 months ago by fracarb8 ▴ 950
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1
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1.2k
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Comment: Comment: highlight subset of cells on tSNE plot
14 months ago by fracarb8 ▴ 950
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0
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537
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Comment: Comment: RNA-Sequencing on RStudio vs batch scripts on Terminal
15 months ago by fracarb8 ▴ 950
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1
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365
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Answer: Answer: How to get DEG considering "clusters" and "samples" at the same time
15 months ago by fracarb8 ▴ 950
139 results • Page 1 of 3
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