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264
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Comment: Comment: Seurat v5 SCTransform warning messages (I consistently get 50 warnings)
15 days ago by fracarb8 ★ 1.7k
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268
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Comment: Comment: DoubletFinder error
15 days ago by fracarb8 ★ 1.7k
2
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1
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405
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Comment: Comment: How to reassign the orientation of clusters in pheatmap
16 days ago by fracarb8 ★ 1.7k
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0
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674
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Comment: Comment: Conversion of Gene Name to Ensembl ID
18 days ago by fracarb8 ★ 1.7k
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265
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Comment: Comment: Monocle3 - gene expression dot plot (ggplot2 equivalent)
4 weeks ago by fracarb8 ★ 1.7k
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1
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497
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
9 weeks ago by fracarb8 ★ 1.7k
1
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0
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899
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Comment: Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction
9 weeks ago by fracarb8 ★ 1.7k
1
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1
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497
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
9 weeks ago by fracarb8 ★ 1.7k
0
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1
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523
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Comment: Comment: What is a good way to do gene differentials in single cell data where one group
9 weeks ago by fracarb8 ★ 1.7k
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1
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541
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
10 weeks ago by fracarb8 ★ 1.7k
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1
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541
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
10 weeks ago by fracarb8 ★ 1.7k
2
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1
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501
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Comment: Comment: I'm new to cell ranger. Can single cells prepared with a protocol other than the
3 months ago by fracarb8 ★ 1.7k
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1
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416
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Comment: Comment: Addmetadata to seurat obj
3 months ago by fracarb8 ★ 1.7k
2
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0
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420
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Comment: Comment: Ubuntu storage space is decreasing automatically
3 months ago by fracarb8 ★ 1.7k
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0
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507
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Comment: Comment: cloupe to 10x format
3 months ago by fracarb8 ★ 1.7k
1
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1
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507
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Answer: Answer: cloupe to 10x format
3 months ago by fracarb8 ★ 1.7k
2
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1
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680
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Answer: Answer: change order of violin plots in ggplot2
updated 4 months ago by 44k • written 4 months ago by ★ 1.7k
1
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1
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1.6k
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Answer: Answer: Subsetting Seurat object based on list of cell barcodes
4 months ago by fracarb8 ★ 1.7k
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0
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634
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Answer: Answer: ArchR Doublet Inference to Signac
4 months ago by fracarb8 ★ 1.7k
2
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1
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455
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Comment: Comment: Seeking help with Tcga Target Gtex Expected Count Data
4 months ago by fracarb8 ★ 1.7k
2
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1
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377
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Comment: Comment: compare dimplot(single cell)
4 months ago by fracarb8 ★ 1.7k
3
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336
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Answer: Answer: Doplot to display 2 metadata variables
4 months ago by fracarb8 ★ 1.7k
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0
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963
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
4 months ago by fracarb8 ★ 1.7k
1
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1
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963
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
4 months ago by fracarb8 ★ 1.7k
0
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1
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963
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
4 months ago by fracarb8 ★ 1.7k
0
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0
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562
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Answer: Answer: Error in changing the annotation color of pheatmap
4 months ago by fracarb8 ★ 1.7k
1
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1
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378
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Comment: Comment: Seeking Guidance on How to Annotate Unusual Cell Populations in Single-Cell Data
4 months ago by fracarb8 ★ 1.7k
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0
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785
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Answer: Answer: Downsampling of cells in scRNAseq DE analysis
4 months ago by fracarb8 ★ 1.7k
1
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0
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446
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Answer: Answer: getting error when transfer labels for my scRNAseq data using FindTransferAnchor
4 months ago by fracarb8 ★ 1.7k
0
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0
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462
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Comment: Comment: How to manually sort the legend of gseaplot2 (enrichplot, clusterProfiler) resul
5 months ago by fracarb8 ★ 1.7k
0
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0
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761
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Answer: Answer: Speed up FindClusters execution?
5 months ago by fracarb8 ★ 1.7k
0
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1
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558
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Comment: Comment: DE Analysis Between A Subset Seurat Object Versus Original Seurat Object
5 months ago by fracarb8 ★ 1.7k
1
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1
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3.2k
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Answer: Answer: JoinLayers to find markers in merged or integrated analysis in seurat
5 months ago by fracarb8 ★ 1.7k
0
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1
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830
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Comment: Comment: Is it necessary to integrate again samples when subclustering
6 months ago by fracarb8 ★ 1.7k
0
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0
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770
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Answer: Answer: Monocle3 gene expression dot plot with a cell data set object (need help with re
6 months ago by fracarb8 ★ 1.7k
2
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1
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1.3k
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Comment: Comment: How to remove center population from seurat cluster
7 months ago by fracarb8 ★ 1.7k
2
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2
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1.3k
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Comment: Comment: How to remove center population from seurat cluster
7 months ago by fracarb8 ★ 1.7k
0
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1
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525
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Comment: Comment: convert dataframe R
7 months ago by fracarb8 ★ 1.7k
2
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1
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525
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Answer: Answer: convert dataframe R
7 months ago by fracarb8 ★ 1.7k
3
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0
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3.2k
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Comment: Comment: Cellcyclescoring did not work in Seurat V5
7 months ago by fracarb8 ★ 1.7k
0
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1
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594
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Comment: Comment: labelling the clusters from the CD4 T cell scRNAseq data
8 months ago by fracarb8 ★ 1.7k
0
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0
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2.3k
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Answer: Answer: DoubletFinder for Python?
8 months ago by fracarb8 ★ 1.7k
2
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0
replies
1.1k
views
Answer: Answer: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
9 months ago by fracarb8 ★ 1.7k
1
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0
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499
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Answer: Answer: seurat-creating heatmaps
9 months ago by fracarb8 ★ 1.7k
0
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1
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1.5k
views
Comment: Comment: Unable to save plots in R using jpeg() or png()
9 months ago by fracarb8 ★ 1.7k
2
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1
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1.5k
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Answer: Answer: Bioinformatics software for single cell omics
9 months ago by fracarb8 ★ 1.7k
0
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0
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3.7k
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Comment: Comment: Code for reading h5ad files in R
9 months ago by fracarb8 ★ 1.7k
0
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1
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3.7k
views
Answer: Answer: Code for reading h5ad files in R
9 months ago by fracarb8 ★ 1.7k
0
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0
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492
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Comment: Comment: Monocle3 garnett
9 months ago by fracarb8 ★ 1.7k
1
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0
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690
views
Answer: Answer: How to get ncol = nrow?
updated 9 months ago by 44k • written 9 months ago by ★ 1.7k
214 results • Page 1 of 5
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