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2.6k
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Has the TRON Expression Atlas closed?
RNA-Seq cell-line
updated 4 months ago by • 0 • written 6.3 years ago by ★ 1.7k
1
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1
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1.0k
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Comment: Comment: Assigning cell annotation based on calculated scores.
6 months ago by fracarb8 ★ 1.7k
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0
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895
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Comment: Comment: After doublet detection in 10x scRNA-Seq data, there is still evidence of double
6 months ago by fracarb8 ★ 1.7k
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1
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823
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Answer: Answer: Do i need to regressout uninteresting sources of variation bebofe pseudobul DESe
10 months ago by fracarb8 ★ 1.7k
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0
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1.0k
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Comment: Comment: Extracting normalized counts from RDS (Seurat) file
12 months ago by fracarb8 ★ 1.7k
1
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0
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3.0k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
13 months ago by fracarb8 ★ 1.7k
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0
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1.1k
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Comment: Comment: Seurat v5 SCTransform warning messages (I consistently get 50 warnings)
14 months ago by fracarb8 ★ 1.7k
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0
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2.3k
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Comment: Comment: DoubletFinder error
14 months ago by fracarb8 ★ 1.7k
2
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1
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2.7k
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Comment: Comment: How to reassign the orientation of clusters in pheatmap
14 months ago by fracarb8 ★ 1.7k
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0
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2.6k
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Comment: Comment: Conversion of Gene Name to Ensembl ID
14 months ago by fracarb8 ★ 1.7k
0
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0
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750
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Comment: Comment: Monocle3 - gene expression dot plot (ggplot2 equivalent)
14 months ago by fracarb8 ★ 1.7k
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1
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1.5k
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
15 months ago by fracarb8 ★ 1.7k
1
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0
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5.0k
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Comment: Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction
15 months ago by fracarb8 ★ 1.7k
1
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1
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1.5k
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
15 months ago by fracarb8 ★ 1.7k
0
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1
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1.1k
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Comment: Comment: What is a good way to do gene differentials in single cell data where one group
15 months ago by fracarb8 ★ 1.7k
0
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1
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1.3k
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
16 months ago by fracarb8 ★ 1.7k
0
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1
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1.3k
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
16 months ago by fracarb8 ★ 1.7k
2
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1
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1.3k
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Comment: Comment: I'm new to cell ranger. Can single cells prepared with a protocol other than the
17 months ago by fracarb8 ★ 1.7k
0
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1
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941
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Comment: Comment: Addmetadata to seurat obj
17 months ago by fracarb8 ★ 1.7k
2
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0
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1.1k
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Comment: Comment: Ubuntu storage space is decreasing automatically
17 months ago by fracarb8 ★ 1.7k
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0
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1.9k
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Comment: Comment: cloupe to 10x format
17 months ago by fracarb8 ★ 1.7k
1
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1
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1.9k
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Answer: Answer: cloupe to 10x format
17 months ago by fracarb8 ★ 1.7k
2
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1
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1.8k
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Answer: Answer: change order of violin plots in ggplot2
updated 18 months ago by 45k • written 18 months ago by ★ 1.7k
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1
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6.0k
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Answer: Answer: Subsetting Seurat object based on list of cell barcodes
18 months ago by fracarb8 ★ 1.7k
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0
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1.1k
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Answer: Answer: ArchR Doublet Inference to Signac
18 months ago by fracarb8 ★ 1.7k
2
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1
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915
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Comment: Comment: Seeking help with Tcga Target Gtex Expected Count Data
18 months ago by fracarb8 ★ 1.7k
2
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1
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816
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Comment: Comment: compare dimplot(single cell)
18 months ago by fracarb8 ★ 1.7k
3
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0
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702
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Answer: Answer: Doplot to display 2 metadata variables
18 months ago by fracarb8 ★ 1.7k
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0
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5.6k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
18 months ago by fracarb8 ★ 1.7k
1
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1
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5.6k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
18 months ago by fracarb8 ★ 1.7k
0
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1
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5.6k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
18 months ago by fracarb8 ★ 1.7k
0
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0
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1.9k
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Answer: Answer: Error in changing the annotation color of pheatmap
18 months ago by fracarb8 ★ 1.7k
1
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1
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763
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Comment: Comment: Seeking Guidance on How to Annotate Unusual Cell Populations in Single-Cell Data
18 months ago by fracarb8 ★ 1.7k
0
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0
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1.5k
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Answer: Answer: Downsampling of cells in scRNAseq DE analysis
18 months ago by fracarb8 ★ 1.7k
1
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0
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1.6k
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Answer: Answer: getting error when transfer labels for my scRNAseq data using FindTransferAnchor
18 months ago by fracarb8 ★ 1.7k
0
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0
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1.1k
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Comment: Comment: How to manually sort the legend of gseaplot2 (enrichplot, clusterProfiler) resul
18 months ago by fracarb8 ★ 1.7k
0
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0
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2.2k
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Answer: Answer: Speed up FindClusters execution?
18 months ago by fracarb8 ★ 1.7k
0
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1
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1.2k
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Comment: Comment: DE Analysis Between A Subset Seurat Object Versus Original Seurat Object
19 months ago by fracarb8 ★ 1.7k
1
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1
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12k
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Answer: Answer: JoinLayers to find markers in merged or integrated analysis in seurat
19 months ago by fracarb8 ★ 1.7k
0
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1
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2.1k
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Comment: Comment: Is it necessary to integrate again samples when subclustering
20 months ago by fracarb8 ★ 1.7k
0
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0
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1.5k
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Answer: Answer: Monocle3 gene expression dot plot with a cell data set object (need help with re
20 months ago by fracarb8 ★ 1.7k
2
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1
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2.9k
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Comment: Comment: How to remove center population from seurat cluster
21 months ago by fracarb8 ★ 1.7k
2
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2
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2.9k
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Comment: Comment: How to remove center population from seurat cluster
21 months ago by fracarb8 ★ 1.7k
0
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1
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1.1k
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Comment: Comment: convert dataframe R
21 months ago by fracarb8 ★ 1.7k
2
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1
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1.1k
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Answer: Answer: convert dataframe R
21 months ago by fracarb8 ★ 1.7k
3
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0
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7.3k
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Comment: Comment: Cellcyclescoring did not work in Seurat V5
21 months ago by fracarb8 ★ 1.7k
0
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1
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1.1k
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Comment: Comment: labelling the clusters from the CD4 T cell scRNAseq data
22 months ago by fracarb8 ★ 1.7k
0
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0
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5.1k
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Answer: Answer: DoubletFinder for Python?
22 months ago by fracarb8 ★ 1.7k
2
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0
replies
2.6k
views
Answer: Answer: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
22 months ago by fracarb8 ★ 1.7k
1
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0
replies
847
views
Answer: Answer: seurat-creating heatmaps
23 months ago by fracarb8 ★ 1.7k
219 results • Page 1 of 5
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