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163
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Comment: Comment: Pearson correlation matrix heat map. The different colors represent Pearson corr
1 day ago by fracarb8 ▴ 810
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151
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Answer: Answer: Clustered, annotated dotplot to scRNA-Seq data
3 days ago by fracarb8 ▴ 810
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347
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Comment: Comment: ESTIMATE tumor purity
8 days ago by fracarb8 ▴ 810
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347
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Answer: Answer: ESTIMATE tumor purity
8 days ago by fracarb8 ▴ 810
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362
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Answer: Answer: What to do with Seurat metadata and counts in separate text files?
25 days ago by fracarb8 ▴ 810
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222
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Answer: Answer: How to add Ensembl id to cluster.markers in Seurat
27 days ago by fracarb8 ▴ 810
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261
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Answer: Answer: Error on R shiny app metaOmics; object %AND% not found
28 days ago by fracarb8 ▴ 810
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261
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Comment: Comment: Error on R shiny app metaOmics; object %AND% not found
4 weeks ago by fracarb8 ▴ 810
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645
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Answer: Answer: Automatic rename of filenames with bash script
5 weeks ago by fracarb8 ▴ 810
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724
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Comment: Comment: Normalization of RNASeq counts with a reference gene (/genes)
6 weeks ago by fracarb8 ▴ 810
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192
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Comment: Comment: Content of Rscript gone after updating
6 weeks ago by fracarb8 ▴ 810
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724
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Answer: Answer: Normalization of RNASeq counts with a reference gene (/genes)
7 weeks ago by fracarb8 ▴ 810
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232
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Answer: Answer: use gene symbol in heatmap instead of ensemble geneID
8 weeks ago by fracarb8 ▴ 810
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276
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Answer: Answer: How to test for gender bias in RNA seq experiment ?
11 weeks ago by fracarb8 ▴ 810
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133
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Comment: Comment: What does it mean by "conformational space"?
11 weeks ago by fracarb8 ▴ 810
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343
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Answer: Answer: When looking at a heatmap created by DESeq2, how can I find what genes are in sp
3 months ago by fracarb8 ▴ 810
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365
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Answer: Answer: MAST for scRNA-seq
3 months ago by fracarb8 ▴ 810
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442
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Comment: Comment: Seurat cluster label transfer
3 months ago by fracarb8 ▴ 810
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295
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Comment: Comment: addModuleScore and enrichment score methods
3 months ago by fracarb8 ▴ 810
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375
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Comment: Comment: highlight subset of cells on tSNE plot
3 months ago by fracarb8 ▴ 810
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348
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Comment: Comment: RNA-Sequencing on RStudio vs batch scripts on Terminal
3 months ago by fracarb8 ▴ 810
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252
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Answer: Answer: How to get DEG considering "clusters" and "samples" at the same time
3 months ago by fracarb8 ▴ 810
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213
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Comment: Comment: Reanalyzing data after Seurat subset
3 months ago by fracarb8 ▴ 810
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652
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Comment: Comment: Seurat Dotplot _ How can I have different panels on my doplot?
4 months ago by fracarb8 ▴ 810
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675
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Answer: Answer: Is there a tool for plotting protein structures and domains?
4 months ago by fracarb8 ▴ 810
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127
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Data Preparation for single-cell Machine Learning classification (svm + RF)
seurat machine-learning scRNA-Seq
4 months ago by fracarb8 ▴ 810
1
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0
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579
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Comment: Comment: How can I add the information at the end of the line to the beginning of the lin
4 months ago by fracarb8 ▴ 810
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579
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Answer: Answer: How can I add the information at the end of the line to the beginning of the lin
4 months ago by fracarb8 ▴ 810
2
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0
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511
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Answer: Answer: Enrichment plot in R with custom pathways
4 months ago by fracarb8 ▴ 810
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0
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381
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Answer: Answer: scRNA and stemness score
5 months ago by fracarb8 ▴ 810
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0
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531
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Answer: Answer: Spatial transcriptomics without the h5 file
5 months ago by fracarb8 ▴ 810
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274
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Answer: Answer: Which method works best for analysing ONE sample of scRNA-seq data?
5 months ago by fracarb8 ▴ 810
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0
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550
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Answer: Answer: Sub clustering from Seurat Object
5 months ago by fracarb8 ▴ 810
2
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1
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717
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Answer: Answer: How can I colour UMAP by sample batches
5 months ago by fracarb8 ▴ 810
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218
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Comment: Comment: How to determine which gene contribute the most to a specific trait.
5 months ago by fracarb8 ▴ 810
2
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0
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503
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Comment: Comment: Forcing Seurat to include certain genes during integration
5 months ago by fracarb8 ▴ 810
4
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2
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503
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Answer: Answer: Forcing Seurat to include certain genes during integration
5 months ago by fracarb8 ▴ 810
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330
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Comment: Comment: Comparison between structure of two protein PDB files
6 months ago by fracarb8 ▴ 810
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1
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1.2k
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Comment: Comment: conversion of ensembl to gene_symbol in seurat
6 months ago by fracarb8 ▴ 810
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0
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879
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Comment: Comment: Help with R code to get a unique list
6 months ago by fracarb8 ▴ 810
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0
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2.7k
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Comment: Comment: seurat, subcluster and trajectory analysis (Monocle 3)
6 months ago by fracarb8 ▴ 810
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1
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2.7k
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Answer: Answer: seurat, subcluster and trajectory analysis (Monocle 3)
6 months ago by fracarb8 ▴ 810
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1
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3.1k
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Answer: Answer: What is a count matrix for input into Seurat supposed to look like?
7 months ago by fracarb8 ▴ 810
1
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0
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401
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Answer: Answer: Estimate cell types proportion by single cell expressions data and gene markers
7 months ago by fracarb8 ▴ 810
1
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1
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969
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Comment: Comment: Keep rows with columns having values between -1 and 1 from a dataframe in R
7 months ago by fracarb8 ▴ 810
2
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1
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1.3k
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Answer: Answer: Extract ENSEMBL IDs from processed Seurat object instead of gene symbols
7 months ago by fracarb8 ▴ 810
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1
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723
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Answer: Answer: just trying to launching my DE-seq2 by csv but isn't work...
7 months ago by fracarb8 ▴ 810
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1
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769
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Comment: Comment: Grouping datasets in Seurat
7 months ago by fracarb8 ▴ 810
4
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3
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769
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Answer: Answer: Grouping datasets in Seurat
7 months ago by fracarb8 ▴ 810
1
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0
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511
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Answer: Answer: How to know if certain gene is highly expressed compared to some common housekee
7 months ago by fracarb8 ▴ 810
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