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1
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0
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652
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Answer:
Answer: UMAP graph using DimPlot pre/post integration
7 months ago by
fracarb8
★ 1.6k
1
vote
1
reply
876
views
Comment:
Comment: Optimal number of features to use when integrate multi samples by Seurat in sc
7 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
1.5k
views
Comment:
Comment: Negative Expression in RNA Assay on Dot Plot After SCT Transform
7 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.5k
views
Answer:
Answer: Negative Expression in RNA Assay on Dot Plot After SCT Transform
7 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
2.3k
views
Answer:
Answer: InferCNV results interpretation
7 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
959
views
Answer:
Answer: Can I using scVI to integrate data, then using R to conduct following analysis?
8 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
1.5k
views
Answer:
Answer: Change transparency/alpha in seurat's vlnPlot()
8 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
541
views
Answer:
Answer: HeatMap, R, Rownames
9 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
795
views
Answer:
Answer: How to obtain cell-cell interaction list
9 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
966
views
Comment:
Comment: Housekeeping genes scRNA seq
9 months ago by
fracarb8
★ 1.6k
0
votes
2
replies
1.5k
views
Comment:
Comment: scrna seq analysis - doublets
9 months ago by
fracarb8
★ 1.6k
5
votes
1
reply
2.4k
views
Answer:
Answer: In Scanpy, how to RDS file and merge it with other Scanpy objects.
9 months ago by
fracarb8
★ 1.6k
7
votes
0
replies
5.2k
views
Answer:
Answer: Convert Human to Mouse Symbols
10 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
775
views
Answer:
Answer: Uploading 10x Data into R for Monocle 3
10 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
682
views
Answer:
Answer: What kind of statistical test does Cellranger count use?
10 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
885
views
Comment:
Comment: How to introduce normalized and scaled seurat data into monocle 3?
11 months ago by
fracarb8
★ 1.6k
2
votes
0
replies
3.9k
views
Answer:
Answer: Seurat 'DoHeatmap()' hierarchical clustering
11 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
944
views
Comment:
Comment: Seurat PlotClusterTree together with heatmap of gene expression
11 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
586
views
Comment:
Comment: Remove string from Seurat Object
12 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
20k
views
Comment:
Comment: How to get subset of a Seurat object based on metadata?
13 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
20k
views
Answer:
Answer: How to get subset of a Seurat object based on metadata?
13 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
1.1k
views
Comment:
Comment: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
13 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.1k
views
Answer:
Answer: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
13 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
2.1k
views
Comment:
Comment: How to solve a possible memory issues with Seurat and IntegrateData step?
14 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
2.1k
views
Answer:
Answer: How to solve a possible memory issues with Seurat and IntegrateData step?
14 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.0k
views
Comment:
Comment: How to use ClusterProfiler
14 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
404
views
Comment:
Comment: Font name used in dittoSeq?
14 months ago by
fracarb8
★ 1.6k
2
votes
1
reply
631
views
Comment:
Comment: R bug during normalize
14 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
661
views
Answer:
Answer: exchange the monocle data with Seurat
14 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
748
views
Comment:
Comment: HLA typing with archasHLA - DNA seq?
15 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
836
views
Comment:
Comment: bash script error to copy files from multiple directories to one directory
16 months ago by
fracarb8
★ 1.6k
2
votes
1
reply
836
views
Answer:
Answer: bash script error to copy files from multiple directories to one directory
16 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
561
views
Answer:
Answer: Extract Monocle2 "State" for Seurat
17 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
1.2k
views
Comment:
Comment: How can I convert -log10 (p-value) to p-value?
17 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
816
views
Comment:
Comment: How to deal with "///" in between gene symbols?
17 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.6k
views
Comment:
Comment: Tuning seurat integration strength to prevent overcorrection
19 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.6k
views
Answer:
Answer: Tuning seurat integration strength to prevent overcorrection
19 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
718
views
Answer:
Answer: What is the best way to process a metadata file that SEURAT can read?
20 months ago by
fracarb8
★ 1.6k
1
vote
1
reply
3.1k
views
Answer:
Answer: SCTransform and differential gene expression
20 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
2.1k
views
Comment:
Comment: Any script that can produce different mutations of protein sequences at specifie
20 months ago by
fracarb8
★ 1.6k
0
votes
2
replies
2.4k
views
Comment:
Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
21 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
2.4k
views
Comment:
Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
21 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
820
views
Comment:
Comment: Pearson correlation matrix heat map. The different colors represent Pearson corr
22 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
946
views
Answer:
Answer: Clustered, annotated dotplot to scRNA-Seq data
22 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.9k
views
Comment:
Comment: ESTIMATE tumor purity
22 months ago by
fracarb8
★ 1.6k
1
vote
1
reply
1.9k
views
Answer:
Answer: ESTIMATE tumor purity
22 months ago by
fracarb8
★ 1.6k
1
vote
1
reply
2.8k
views
Answer:
Answer: What to do with Seurat metadata and counts in separate text files?
23 months ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.1k
views
Answer:
Answer: How to add Ensembl id to cluster.markers in Seurat
23 months ago by
fracarb8
★ 1.6k
2
votes
0
replies
1.1k
views
Answer:
Answer: Error on R shiny app metaOmics; object %AND% not found
23 months ago by
fracarb8
★ 1.6k
1
vote
1
reply
1.1k
views
Comment:
Comment: Error on R shiny app metaOmics; object %AND% not found
23 months ago by
fracarb8
★ 1.6k
203 results • Page
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