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Comment: C: Best way to call differencially methylated positions taking into account results
5.3 years ago by Papyrus ★ 3.1k
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1.9k
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Answer: A: Best way to call differencially methylated positions taking into account results
5.3 years ago by Papyrus ★ 3.1k
1
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1
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1.3k
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Comment: C: How to pull logFC values for a select ENTREZID from a gene-list on R?
5.3 years ago by Papyrus ★ 3.1k
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Answer: C: How to pull logFC values for a select ENTREZID from a gene-list on R?
5.3 years ago by Papyrus ★ 3.1k
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Answer: A: How can I filter RNA-seq reads to remove reads where more than 50% of the read i
5.3 years ago by Papyrus ★ 3.1k
4
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Answer: C: How to check if there is an association between clustering output (groups) and p
5.3 years ago by Papyrus ★ 3.1k
3
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1
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5.2k
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Answer: A: What to choose as background genes in GO enrichment analysis
5.3 years ago by Papyrus ★ 3.1k
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1
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2.3k
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Comment: C: Too many enriched GO terms using Goseq
5.3 years ago by Papyrus ★ 3.1k
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1
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2.3k
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Comment: C: Too many enriched GO terms using Goseq
5.3 years ago by Papyrus ★ 3.1k
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Comment: C: Whole-genome human-mouse syntenic block tracks/database
5.3 years ago by Papyrus ★ 3.1k
1
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3
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1.5k
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Whole-genome human-mouse syntenic block tracks/database
synteny genome mouse conservation homology
5.3 years ago by Papyrus ★ 3.1k
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1
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19k
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Comment: C: How to create a GSEA enrichment plot for the phenotypes in R?
5.3 years ago by Papyrus ★ 3.1k
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1
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1.3k
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Comment: C: Pathways analysis taking into account the number of times a gene is present amon
5.4 years ago by Papyrus ★ 3.1k
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1
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1.3k
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Comment: C: Pathways analysis taking into account the number of times a gene is present amon
5.4 years ago by Papyrus ★ 3.1k
0
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1
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1.3k
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Answer: C: Pathways analysis taking into account the number of times a gene is present amon
5.4 years ago by Papyrus ★ 3.1k
0
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1
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2.6k
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Comment: C: Run RnBeads with 'bismarkCytosine' files
5.4 years ago by Papyrus ★ 3.1k
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3.0k
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Comment: C: Too many differentially expressed genes in voom
5.4 years ago by Papyrus ★ 3.1k
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0
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3.0k
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Comment: C: Too many differentially expressed genes in voom
5.4 years ago by Papyrus ★ 3.1k
2
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1
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2.8k
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Answer: A: Unable to perform for loop over list of GRanges
5.4 years ago by Papyrus ★ 3.1k
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1
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2.8k
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Comment: C: Unable to perform for loop over list of GRanges
5.4 years ago by Papyrus ★ 3.1k
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1.3k
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Comment: C: FastQC duplicate sequence plot for targeted sequencing libraries
5.4 years ago by Papyrus ★ 3.1k
2
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1
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3.9k
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Comment: C: Issues with adding gene name and entrez ID to DESeq2 result having Ensembl ID.
5.4 years ago by Papyrus ★ 3.1k
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2.5k
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Comment: C: WGBS Data Analysis Related
5.4 years ago by Papyrus ★ 3.1k
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2
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2.5k
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Comment: C: WGBS Data Analysis Related
5.4 years ago by Papyrus ★ 3.1k
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2
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2.5k
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Comment: C: WGBS Data Analysis Related
5.4 years ago by Papyrus ★ 3.1k
2
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0
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1.6k
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Comment: C: How to subset DESeq2 results
5.4 years ago by Papyrus ★ 3.1k
1
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1
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1.4k
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Comment: C: How to distinguish FPKM from TPM?
5.4 years ago by Papyrus ★ 3.1k
0
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1
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2.1k
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Comment: C: How to do differential methylation analysis on huge WGBS data from plant?
5.5 years ago by Papyrus ★ 3.1k
1
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2
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9.2k
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Comment: C: findGenomeMotif.pl in Homer couldn't work properly
5.5 years ago by Papyrus ★ 3.1k
1
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0
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1.1k
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Comment: C: RNAseq and microarray combined clustering
5.5 years ago by Papyrus ★ 3.1k
0
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0
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2.3k
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Comment: C: Calculate correlations between ChipSeq data sets
5.5 years ago by Papyrus ★ 3.1k
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1.0k
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Answer: C: Limma to Compare Bulk RNA Seq using makeContrasts and eBayes
5.6 years ago by Papyrus ★ 3.1k
1
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1
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1.1k
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Comment: C: Correlating RNA-seq and ChIP-seq data? Concurrence frequencies as metric?
5.6 years ago by Papyrus ★ 3.1k
0
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1
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9.0k
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Answer: A: How to create tx2gene object with gene names from annotation
5.6 years ago by Papyrus ★ 3.1k
0
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0
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1.3k
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Answer: A: DNA methylation and TCGA and normal sample tissue
5.6 years ago by Papyrus ★ 3.1k
3
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1
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4.2k
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Comment: C: Why do some gene set enrichment services do not ask for a background data set
5.6 years ago by Papyrus ★ 3.1k
2
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1
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4.2k
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Comment: C: Why do some gene set enrichment services do not ask for a background data set
5.6 years ago by Papyrus ★ 3.1k
0
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0
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1.0k
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Single-sample methylation region-finder packages
epigenetics methylation wgbs DMR regions
5.9 years ago by Papyrus ★ 3.1k
0
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0
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1.5k
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Comment: C: Suggestions for R/Bioconductor packages for GSE analysis
6.1 years ago by Papyrus ★ 3.1k
1
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1
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13k
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Comment: C: SVA : Setting up the data from an ExpressionSet and applying sva function to ext
6.3 years ago by Papyrus ★ 3.1k
0
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1
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13k
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Comment: C: SVA : Setting up the data from an ExpressionSet and applying sva function to ext
6.3 years ago by Papyrus ★ 3.1k
0
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1
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13k
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Comment: C: SVA : Setting up the data from an ExpressionSet and applying sva function to ext
6.3 years ago by Papyrus ★ 3.1k
0
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1
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13k
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Comment: C: SVA : Setting up the data from an ExpressionSet and applying sva function to ext
6.3 years ago by Papyrus ★ 3.1k
343 results • Page 7 of 7
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