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2
votes
0
replies
768
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Answer:
Answer: Using LiftOver to change genomic build
3 months ago by
Giulio Genovese
▴ 290
0
votes
0
replies
949
views
Comment:
Comment: Can't liftover vcf file from hg19 to hg38
3 months ago by
Giulio Genovese
▴ 290
2
votes
0
replies
362
views
Answer:
Answer: Axiom PMRA cel files to VCF format
3 months ago by
Giulio Genovese
▴ 290
1
vote
0
replies
949
views
Comment:
Comment: Can't liftover vcf file from hg19 to hg38
3 months ago by
Giulio Genovese
▴ 290
1
vote
2
replies
949
views
Comment:
Comment: Can't liftover vcf file from hg19 to hg38
3 months ago by
Giulio Genovese
▴ 290
1
vote
1
reply
949
views
Comment:
Comment: Can't liftover vcf file from hg19 to hg38
3 months ago by
Giulio Genovese
▴ 290
3
votes
2
replies
949
views
Answer:
Answer: Can't liftover vcf file from hg19 to hg38
3 months ago by
Giulio Genovese
▴ 290
0
votes
0
replies
889
views
Comment:
Comment: High ref mismatch rate after liftOver from 23andme hg19 to hg38
4 months ago by
Giulio Genovese
▴ 290
1
vote
1
reply
889
views
Answer:
Answer: High ref mismatch rate after liftOver from 23andme hg19 to hg38
4 months ago by
Giulio Genovese
▴ 290
0
votes
0
replies
1.1k
views
Answer:
Answer: gatk LiftoverVCF finishes with no output VCF nor error.
4 months ago by
Giulio Genovese
▴ 290
0
votes
0
replies
649
views
Answer:
Answer: Looking for LDL GWAS summary stats in hg38
4 months ago by
Giulio Genovese
▴ 290
2
votes
0
replies
1.2k
views
Comment:
Comment: Picard LiftOver rejecting all Variants
4 months ago by
Giulio Genovese
▴ 290
4
votes
1
reply
1.2k
views
Answer:
Answer: Picard LiftOver rejecting all Variants
4 months ago by
Giulio Genovese
▴ 290
0
votes
0
replies
2.4k
views
Comment:
Comment: How can I create an Illumina report in Linux using IDAT files?
2.1 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
2.4k
views
Comment:
Comment: How can I create an Illumina report in Linux using IDAT files?
2.1 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
1.8k
views
Comment:
C: What reference build are affymetrix 5.0 arrays?
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
1
reply
1.8k
views
Comment:
C: What reference build are affymetrix 5.0 arrays?
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
1
reply
1.8k
views
Answer:
A: What reference build are affymetrix 5.0 arrays?
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
1.8k
views
Answer:
A: SNP array CNV calling for Cancer tissue (.CEL files)
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
3.4k
views
Answer:
A: conversion from CEL file to PLINK format (.map, .ped)
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
4.4k
views
Answer:
A: How to convert and annotate apt-probeset-genotype into PLINK format
3.4 years ago by
Giulio Genovese
▴ 290
1
vote
1
reply
7.7k
views
Answer:
A: Get Genotypes From Affymetrix Snp 6.0 Array
3.4 years ago by
Giulio Genovese
▴ 290
1
vote
0
replies
3.3k
views
Answer:
A: Illumina Manifest files - A1 vs. A2
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
1
reply
1.7k
views
Answer:
A: Is there an allternative to Affymetrix GTC for Genotyping?
3.4 years ago by
Giulio Genovese
▴ 290
1
vote
1
reply
5.2k
views
Answer:
A: Automate Illumina GenomeStudio With Python Script
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
1
reply
3.0k
views
Answer:
A: Are there any GenomeStudio alternatives to process Illumina genotyping array?
3.4 years ago by
Giulio Genovese
▴ 290
1
vote
1
reply
8.1k
views
Answer:
A: From genotype raw data .idat to PLINK files
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
3.3k
views
Answer:
A: How to extract and save the header of .bam,vcf and idat files in a text file
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
3.5k
views
Answer:
A: Recalling SNPs count from Illumina SNP array raw data
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
3.3k
views
Answer:
A: how to use idat file for analyses in bioconductor
3.4 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
2.8k
views
Answer:
A: genotyping according to the red/green intensity for illumina microarray?
3.4 years ago by
Giulio Genovese
▴ 290
1
vote
0
replies
1.7k
views
Answer:
A: How to create manifest file for Illumnina GTCtoVCF
3.4 years ago by
Giulio Genovese
▴ 290
2
votes
0
replies
9.3k
views
Answer:
A: How To Grep A Specific Contig From A List?
updated 3.7 years ago by
Ram
39k • written 10.8 years ago by
Giulio Genovese
▴ 290
3
votes
0
replies
5.9k
views
Answer:
A: How To Convert Illumina/Affy Array Data To Vcf Format
4.7 years ago by
Giulio Genovese
▴ 290
1
vote
0
replies
3.9k
views
Answer:
A: Illumina BeadArray GTC to VCF conversion
4.9 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
4.8k
views
Answer:
A: How to extract raw genotype calls from idat or gtc illumina files
4.9 years ago by
Giulio Genovese
▴ 290
0
votes
0
replies
8.0k
views
Answer:
A: How to Convert Illumina reports to Vcf files?
4.9 years ago by
Giulio Genovese
▴ 290
0
votes
1
reply
7.5k
views
Answer:
A: Read binary Illumina GTC files (1000 genomes)
4.9 years ago by
Giulio Genovese
▴ 290
1
vote
0
replies
5.6k
views
Answer:
A: Illumina HumanOmniExpress IDAT files
4.9 years ago by
Giulio Genovese
▴ 290
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