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2
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269
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Answer: Answer: Does vg provides an api?
12 days ago by Jordan M Eizenga ▴ 640
1
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658
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Comment: Comment: question about Varias of graph format. How to get the sequence and source of a
6 weeks ago by Jordan M Eizenga ▴ 640
0
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0
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358
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Comment: Comment: VG - Verifying presence or absence of variants in Pangenome Graph
7 weeks ago by Jordan M Eizenga ▴ 640
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1
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358
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Answer: Answer: VG - Verifying presence or absence of variants in Pangenome Graph
8 weeks ago by Jordan M Eizenga ▴ 640
1
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0
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739
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Comment: Comment: sequenceTubeMap input files
9 weeks ago by Jordan M Eizenga ▴ 640
1
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1
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594
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Comment: Comment: advice for visualizing a graph genome constructed by "vg construct"
9 weeks ago by Jordan M Eizenga ▴ 640
0
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1
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739
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Comment: Comment: sequenceTubeMap input files
9 weeks ago by Jordan M Eizenga ▴ 640
0
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1
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739
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Comment: Comment: sequenceTubeMap input files
9 weeks ago by Jordan M Eizenga ▴ 640
1
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1
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739
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Comment: Comment: sequenceTubeMap input files
9 weeks ago by Jordan M Eizenga ▴ 640
0
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1
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594
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Comment: Comment: advice for visualizing a graph genome constructed by "vg construct"
9 weeks ago by Jordan M Eizenga ▴ 640
2
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1
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594
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Answer: Answer: advice for visualizing a graph genome constructed by "vg construct"
10 weeks ago by Jordan M Eizenga ▴ 640
1
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0
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207
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Comment: Comment: Simulating mRNA-seq data using VG - theoretical question
10 weeks ago by Jordan M Eizenga ▴ 640
0
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0
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254
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Comment: Comment: compare vg stat scores
11 weeks ago by Jordan M Eizenga ▴ 640
1
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1
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739
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Comment: Comment: sequenceTubeMap input files
11 weeks ago by Jordan M Eizenga ▴ 640
3
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1
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739
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Answer: Answer: sequenceTubeMap input files
12 weeks ago by Jordan M Eizenga ▴ 640
1
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0
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322
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Comment: Comment: vg giraffe handling of second vs. supplemental/split alignments, novel SVs, and
3 months ago by Jordan M Eizenga ▴ 640
0
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1
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977
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Comment: Comment: Is there a way to quickly calculate the nodes' average coverage of variation gra
3 months ago by Jordan M Eizenga ▴ 640
1
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1
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977
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Comment: Comment: Is there a way to quickly calculate the nodes' average coverage of variation gra
3 months ago by Jordan M Eizenga ▴ 640
0
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1
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977
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Comment: Comment: Is there a way to quickly calculate the nodes' average coverage of variation gra
3 months ago by Jordan M Eizenga ▴ 640
1
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2
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497
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Comment: Comment: vg autoindex memory issues Signal 6 has occured
3 months ago by Jordan M Eizenga ▴ 640
0
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1
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507
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Comment: Comment: VG autoindexing error: Chromosome path not found in graph or haplotypes
4 months ago by Jordan M Eizenga ▴ 640
0
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0
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268
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Comment: Comment: vg giraffe, accept admixed single and paired reads as input
4 months ago by Jordan M Eizenga ▴ 640
1
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1
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507
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Comment: Comment: VG autoindexing error: Chromosome path not found in graph or haplotypes
4 months ago by Jordan M Eizenga ▴ 640
0
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0
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285
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Comment: Comment: Extracting haplotype-specific annotations from splicing graph
4 months ago by Jordan M Eizenga ▴ 640
0
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0
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315
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Comment: Comment: Vg Call error multiple paths detected using HPRC-GRCH38 ref
4 months ago by Jordan M Eizenga ▴ 640
0
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0
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333
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Comment: Comment: Help with VG Toolkit: VCF Output is Empty
5 months ago by Jordan M Eizenga ▴ 640
1
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0
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820
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Comment: Comment: Does vg call allow fuzzy match during SV calling?
7 months ago by Jordan M Eizenga ▴ 640
0
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1
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820
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Comment: Comment: Does vg call allow fuzzy match during SV calling?
7 months ago by Jordan M Eizenga ▴ 640
0
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1
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820
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Comment: Comment: Does vg call allow fuzzy match during SV calling?
7 months ago by Jordan M Eizenga ▴ 640
1
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1
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820
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Answer: Answer: Does vg call allow fuzzy match during SV calling?
7 months ago by Jordan M Eizenga ▴ 640
1
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0
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449
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Comment: Comment: Distance index computation during `vg --autoindex` takes too long with one GFA f
8 months ago by Jordan M Eizenga ▴ 640
0
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1
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498
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Comment: Comment: Problem with vg autoindex with phased VCF
8 months ago by Jordan M Eizenga ▴ 640
0
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0
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457
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Comment: Comment: How to split alignment into smaller chunks with node range
8 months ago by Jordan M Eizenga ▴ 640
1
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0
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670
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Comment: Comment: vg sim error: [insert_gbwt_path()] path name already exists:
9 months ago by Jordan M Eizenga ▴ 640
0
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0
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1.1k
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Comment: Comment: vg: How to find node Position and source(sample) ?
9 months ago by Jordan M Eizenga ▴ 640
0
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0
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674
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Answer: Answer: The number of variations in the pan-genome is reduced compared to the variations
10 months ago by Jordan M Eizenga ▴ 640
1
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1
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1.1k
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Answer: Answer: How to find node Postion and source(sample) ?
10 months ago by Jordan M Eizenga ▴ 640
1
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0
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1.6k
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Comment: Comment: need interpretations for the vg call output
11 months ago by Jordan M Eizenga ▴ 640
1
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0
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978
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Answer: Answer: Can I use vg tools to calculate the depth for a bed range file like with samtoo
11 months ago by Jordan M Eizenga ▴ 640
2
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1
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1.3k
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Answer: Answer: vg call - Selecting reference path to call on
11 months ago by Jordan M Eizenga ▴ 640
1
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0
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1.6k
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Answer: Answer: need interpretations for the vg call output
11 months ago by Jordan M Eizenga ▴ 640
0
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1
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1.0k
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Comment: Comment: Lack of correspondance of GFA node IDs to giraffe/call node IDs
12 months ago by Jordan M Eizenga ▴ 640
1
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0
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901
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Comment: Comment: Challenges in Variant Calling and Genotyping with Short-Read Data Mapped to a Pa
12 months ago by Jordan M Eizenga ▴ 640
0
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0
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597
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Answer: Answer: Interpretation question regarding vg call result vcf
12 months ago by Jordan M Eizenga ▴ 640
0
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0
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719
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Comment: Comment: HiFi read alignment with vg giraffe
12 months ago by Jordan M Eizenga ▴ 640
0
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0
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688
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Comment: Comment: Bug of vg surject
12 months ago by Jordan M Eizenga ▴ 640
0
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1
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688
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Comment: Comment: Bug of vg surject
12 months ago by Jordan M Eizenga ▴ 640
0
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0
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582
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Comment: Comment: Identify parent of each read in a GAF
13 months ago by Jordan M Eizenga ▴ 640
0
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0
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668
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Comment: Comment: vg rna pantranscriptome
13 months ago by Jordan M Eizenga ▴ 640
0
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1
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1.7k
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Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
13 months ago by Jordan M Eizenga ▴ 640
117 results • Page 1 of 3
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