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Comment: Comment: How to split alignment into smaller chunks with node range
21 months ago by Jordan M Eizenga ▴ 760
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1.2k
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Comment: Comment: vg sim error: [insert_gbwt_path()] path name already exists:
21 months ago by Jordan M Eizenga ▴ 760
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2.1k
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Comment: Comment: vg: How to find node Position and source(sample) ?
22 months ago by Jordan M Eizenga ▴ 760
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0
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999
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Answer: Answer: The number of variations in the pan-genome is reduced compared to the variations
23 months ago by Jordan M Eizenga ▴ 760
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2.1k
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Answer: Answer: How to find node Postion and source(sample) ?
23 months ago by Jordan M Eizenga ▴ 760
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2.7k
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Comment: Comment: need interpretations for the vg call output
23 months ago by Jordan M Eizenga ▴ 760
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0
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1.8k
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Answer: Answer: Can I use vg tools to calculate the depth for a bed range file like with samtoo
24 months ago by Jordan M Eizenga ▴ 760
2
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1
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2.5k
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Answer: Answer: vg call - Selecting reference path to call on
24 months ago by Jordan M Eizenga ▴ 760
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0
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2.7k
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Answer: Answer: need interpretations for the vg call output
2.0 years ago by Jordan M Eizenga ▴ 760
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1
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2.1k
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Comment: Comment: Lack of correspondance of GFA node IDs to giraffe/call node IDs
2.0 years ago by Jordan M Eizenga ▴ 760
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0
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1.6k
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Comment: Comment: Challenges in Variant Calling and Genotyping with Short-Read Data Mapped to a Pa
2.0 years ago by Jordan M Eizenga ▴ 760
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0
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970
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Answer: Answer: Interpretation question regarding vg call result vcf
2.0 years ago by Jordan M Eizenga ▴ 760
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0
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1.2k
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Comment: Comment: HiFi read alignment with vg giraffe
2.0 years ago by Jordan M Eizenga ▴ 760
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0
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1.1k
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Comment: Comment: Bug of vg surject
2.1 years ago by Jordan M Eizenga ▴ 760
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1
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1.1k
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Comment: Comment: Bug of vg surject
2.1 years ago by Jordan M Eizenga ▴ 760
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0
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978
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Comment: Comment: Identify parent of each read in a GAF
2.1 years ago by Jordan M Eizenga ▴ 760
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1.2k
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Comment: Comment: vg rna pantranscriptome
2.1 years ago by Jordan M Eizenga ▴ 760
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1
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2.6k
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Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
2.2 years ago by Jordan M Eizenga ▴ 760
0
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1
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4.8k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
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1
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4.8k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
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0
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4.8k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
0
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2
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2.6k
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Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
2.2 years ago by Jordan M Eizenga ▴ 760
2
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1
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2.6k
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Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
2.2 years ago by Jordan M Eizenga ▴ 760
1
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1
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1.3k
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Comment: Comment: VG node not present in graph
2.2 years ago by Jordan M Eizenga ▴ 760
1
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0
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2.2k
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Answer: Answer: Is there a 1000GP pangenome available?
2.2 years ago by Jordan M Eizenga ▴ 760
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2
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4.8k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
0
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2
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4.8k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
0
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1
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4.8k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
0
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1
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4.8k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
0
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1
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4.8k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
0
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1
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4.8k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
0
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1
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4.8k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
2.2 years ago by Jordan M Eizenga ▴ 760
2
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0
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2.6k
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Comment: Comment: How to identify which genome the variations in the pan-genome graph originate fr
2.2 years ago by Jordan M Eizenga ▴ 760
0
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0
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1.8k
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Comment: Comment: how to compare mapping of WES samples to human pangenome?
2.2 years ago by Jordan M Eizenga ▴ 760
1
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2
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1.8k
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Comment: Comment: how to compare mapping of WES samples to human pangenome?
2.2 years ago by Jordan M Eizenga ▴ 760
1
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0
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2.6k
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Comment: Comment: How to identify which genome the variations in the pan-genome graph originate fr
2.2 years ago by Jordan M Eizenga ▴ 760
1
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1
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2.8k
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Comment: Comment: VG Giraffe multi-mapped reads and definition for MAPQ score
2.3 years ago by Jordan M Eizenga ▴ 760
1
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0
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5.0k
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Comment: Comment: SV calling using giraffe/vg
2.3 years ago by Jordan M Eizenga ▴ 760
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2
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2.8k
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Comment: Comment: VG Giraffe multi-mapped reads and definition for MAPQ score
2.3 years ago by Jordan M Eizenga ▴ 760
0
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0
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2.3k
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Comment: Comment: vg map time consuming
2.3 years ago by Jordan M Eizenga ▴ 760
0
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1
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1.7k
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Comment: Comment: Substantial reduction in read mapping following VG surject
2.3 years ago by Jordan M Eizenga ▴ 760
2
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1
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2.0k
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Answer: Answer: Indexing the human pangenome draft
2.3 years ago by Jordan M Eizenga ▴ 760
1
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0
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2.0k
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Comment: Comment: Indexing the human pangenome draft
2.3 years ago by Jordan M Eizenga ▴ 760
1
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0
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2.5k
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Comment: Comment: population-level stratagy of vg call
2.3 years ago by Jordan M Eizenga ▴ 760
0
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1
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2.5k
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Comment: Comment: population-level stratagy of vg call
2.3 years ago by Jordan M Eizenga ▴ 760
2
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1
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2.8k
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Comment: Comment: VG Giraffe multi-mapped reads and definition for MAPQ score
2.3 years ago by Jordan M Eizenga ▴ 760
1
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0
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2.0k
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Comment: Comment: Use giraffe in vg
2.3 years ago by Jordan M Eizenga ▴ 760
1
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2
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2.3k
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Comment: Comment: vg map time consuming
2.3 years ago by Jordan M Eizenga ▴ 760
1
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1
reply
2.3k
views
Comment: Comment: vg map time consuming
2.3 years ago by Jordan M Eizenga ▴ 760
1
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1
reply
2.3k
views
Answer: Answer: vg map time consuming
2.3 years ago by Jordan M Eizenga ▴ 760
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