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Comment: Comment: Is vg toolkit suitable for haplotype calling?
15 hours ago by Jordan M Eizenga ▴ 700
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288
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Comment: Comment: Is vg toolkit suitable for haplotype calling?
2 days ago by Jordan M Eizenga ▴ 700
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1
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422
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Comment: Comment: What does vg autoindex mpmap do?
12 days ago by Jordan M Eizenga ▴ 700
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761
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Comment: Comment: vg mod changes a graph, but what about a gam or gamp to the original graph?
4 months ago by Jordan M Eizenga ▴ 700
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2
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761
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Comment: Comment: vg mod changes a graph, but what about a gam or gamp to the original graph?
4 months ago by Jordan M Eizenga ▴ 700
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0
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379
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Comment: Comment: split gamp by chromosome or extract specific regions.
5 months ago by Jordan M Eizenga ▴ 700
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0
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953
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Comment: Comment: vg autoindex memory issues Signal 6 has occured
5 months ago by Jordan M Eizenga ▴ 700
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0
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976
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Comment: Comment: question about Varias of graph format. How to get the sequence and source of a
7 months ago by Jordan M Eizenga ▴ 700
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0
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683
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Comment: Comment: VG - Verifying presence or absence of variants in Pangenome Graph
8 months ago by Jordan M Eizenga ▴ 700
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0
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1.4k
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Comment: Comment: sequenceTubeMap input files
8 months ago by Jordan M Eizenga ▴ 700
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1.2k
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Comment: Comment: advice for visualizing a graph genome constructed by "vg construct"
8 months ago by Jordan M Eizenga ▴ 700
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1
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1.4k
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Comment: Comment: sequenceTubeMap input files
8 months ago by Jordan M Eizenga ▴ 700
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1
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1.4k
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Comment: Comment: sequenceTubeMap input files
8 months ago by Jordan M Eizenga ▴ 700
1
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1
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1.4k
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Comment: Comment: sequenceTubeMap input files
8 months ago by Jordan M Eizenga ▴ 700
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1
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1.2k
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Comment: Comment: advice for visualizing a graph genome constructed by "vg construct"
8 months ago by Jordan M Eizenga ▴ 700
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0
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413
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Comment: Comment: Simulating mRNA-seq data using VG - theoretical question
8 months ago by Jordan M Eizenga ▴ 700
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0
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446
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Comment: Comment: compare vg stat scores
8 months ago by Jordan M Eizenga ▴ 700
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1
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1.4k
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Comment: Comment: sequenceTubeMap input files
9 months ago by Jordan M Eizenga ▴ 700
1
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0
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585
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Comment: Comment: vg giraffe handling of second vs. supplemental/split alignments, novel SVs, and
9 months ago by Jordan M Eizenga ▴ 700
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1
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1.3k
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Comment: Comment: Is there a way to quickly calculate the nodes' average coverage of variation gra
10 months ago by Jordan M Eizenga ▴ 700
1
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1
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1.3k
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Comment: Comment: Is there a way to quickly calculate the nodes' average coverage of variation gra
10 months ago by Jordan M Eizenga ▴ 700
0
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1
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1.3k
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Comment: Comment: Is there a way to quickly calculate the nodes' average coverage of variation gra
10 months ago by Jordan M Eizenga ▴ 700
1
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2
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953
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Comment: Comment: vg autoindex memory issues Signal 6 has occured
10 months ago by Jordan M Eizenga ▴ 700
0
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1
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985
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Comment: Comment: VG autoindexing error: Chromosome path not found in graph or haplotypes
10 months ago by Jordan M Eizenga ▴ 700
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0
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431
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Comment: Comment: vg giraffe, accept admixed single and paired reads as input
10 months ago by Jordan M Eizenga ▴ 700
1
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1
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985
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Comment: Comment: VG autoindexing error: Chromosome path not found in graph or haplotypes
10 months ago by Jordan M Eizenga ▴ 700
0
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0
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443
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Comment: Comment: Extracting haplotype-specific annotations from splicing graph
10 months ago by Jordan M Eizenga ▴ 700
0
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0
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605
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Comment: Comment: Vg Call error multiple paths detected using HPRC-GRCH38 ref
10 months ago by Jordan M Eizenga ▴ 700
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0
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513
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Comment: Comment: Help with VG Toolkit: VCF Output is Empty
11 months ago by Jordan M Eizenga ▴ 700
1
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0
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1.3k
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Comment: Comment: Does vg call allow fuzzy match during SV calling?
13 months ago by Jordan M Eizenga ▴ 700
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1
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1.3k
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Comment: Comment: Does vg call allow fuzzy match during SV calling?
13 months ago by Jordan M Eizenga ▴ 700
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1
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1.3k
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Comment: Comment: Does vg call allow fuzzy match during SV calling?
13 months ago by Jordan M Eizenga ▴ 700
1
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0
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670
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Comment: Comment: Distance index computation during `vg --autoindex` takes too long with one GFA f
14 months ago by Jordan M Eizenga ▴ 700
0
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1
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689
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Comment: Comment: Problem with vg autoindex with phased VCF
15 months ago by Jordan M Eizenga ▴ 700
0
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0
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619
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Comment: Comment: How to split alignment into smaller chunks with node range
15 months ago by Jordan M Eizenga ▴ 700
1
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0
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903
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Comment: Comment: vg sim error: [insert_gbwt_path()] path name already exists:
15 months ago by Jordan M Eizenga ▴ 700
0
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0
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1.6k
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Comment: Comment: vg: How to find node Position and source(sample) ?
15 months ago by Jordan M Eizenga ▴ 700
1
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0
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2.1k
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Comment: Comment: need interpretations for the vg call output
17 months ago by Jordan M Eizenga ▴ 700
0
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1
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1.4k
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Comment: Comment: Lack of correspondance of GFA node IDs to giraffe/call node IDs
18 months ago by Jordan M Eizenga ▴ 700
1
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0
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1.2k
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Comment: Comment: Challenges in Variant Calling and Genotyping with Short-Read Data Mapped to a Pa
18 months ago by Jordan M Eizenga ▴ 700
0
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0
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927
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Comment: Comment: HiFi read alignment with vg giraffe
18 months ago by Jordan M Eizenga ▴ 700
0
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0
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899
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Comment: Comment: Bug of vg surject
19 months ago by Jordan M Eizenga ▴ 700
0
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1
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899
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Comment: Comment: Bug of vg surject
19 months ago by Jordan M Eizenga ▴ 700
0
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0
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754
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Comment: Comment: Identify parent of each read in a GAF
19 months ago by Jordan M Eizenga ▴ 700
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0
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874
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Comment: Comment: vg rna pantranscriptome
19 months ago by Jordan M Eizenga ▴ 700
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1
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2.1k
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Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
20 months ago by Jordan M Eizenga ▴ 700
0
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1
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3.9k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
20 months ago by Jordan M Eizenga ▴ 700
0
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1
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3.9k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
20 months ago by Jordan M Eizenga ▴ 700
0
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0
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3.9k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
20 months ago by Jordan M Eizenga ▴ 700
0
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2
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2.1k
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Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
20 months ago by Jordan M Eizenga ▴ 700
107 results • Page 1 of 3
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