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Comment: Comment: Does vg call allow fuzzy match during SV calling?
7 weeks ago by Jordan M Eizenga ▴ 460
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1
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471
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Comment: Comment: Does vg call allow fuzzy match during SV calling?
7 weeks ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
471
views
Comment: Comment: Does vg call allow fuzzy match during SV calling?
7 weeks ago by Jordan M Eizenga ▴ 460
1
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0
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276
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Comment: Comment: Distance index computation during `vg --autoindex` takes too long with one GFA f
10 weeks ago by Jordan M Eizenga ▴ 460
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1
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339
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Comment: Comment: Problem with vg autoindex with phased VCF
3 months ago by Jordan M Eizenga ▴ 460
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0
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296
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Comment: Comment: How to split alignment into smaller chunks with node range
3 months ago by Jordan M Eizenga ▴ 460
1
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466
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Comment: Comment: vg sim error: [insert_gbwt_path()] path name already exists:
3 months ago by Jordan M Eizenga ▴ 460
0
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0
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713
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Comment: Comment: vg: How to find node Position and source(sample) ?
3 months ago by Jordan M Eizenga ▴ 460
1
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1.1k
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Comment: Comment: need interpretations for the vg call output
5 months ago by Jordan M Eizenga ▴ 460
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1
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771
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Comment: Comment: Lack of correspondance of GFA node IDs to giraffe/call node IDs
6 months ago by Jordan M Eizenga ▴ 460
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0
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682
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Comment: Comment: Challenges in Variant Calling and Genotyping with Short-Read Data Mapped to a Pa
6 months ago by Jordan M Eizenga ▴ 460
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0
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536
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Comment: Comment: HiFi read alignment with vg giraffe
6 months ago by Jordan M Eizenga ▴ 460
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0
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523
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Comment: Comment: Bug of vg surject
7 months ago by Jordan M Eizenga ▴ 460
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1
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523
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Comment: Comment: Bug of vg surject
7 months ago by Jordan M Eizenga ▴ 460
0
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0
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427
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Comment: Comment: Identify parent of each read in a GAF
7 months ago by Jordan M Eizenga ▴ 460
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502
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Comment: Comment: vg rna pantranscriptome
7 months ago by Jordan M Eizenga ▴ 460
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1
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1.4k
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Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
7 months ago by Jordan M Eizenga ▴ 460
0
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1
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2.3k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
7 months ago by Jordan M Eizenga ▴ 460
0
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1
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2.3k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
0
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0
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2.3k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
0
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2
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1.4k
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Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
8 months ago by Jordan M Eizenga ▴ 460
2
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1
reply
1.4k
views
Comment: Comment: VG mapping paired-end reads: error [xg]: multiple hits for XXX
8 months ago by Jordan M Eizenga ▴ 460
1
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1
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575
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Comment: Comment: VG node not present in graph
8 months ago by Jordan M Eizenga ▴ 460
0
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2
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2.3k
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Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
0
votes
2
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2.3k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
0
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1
reply
2.3k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
2.3k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
2.3k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
2.3k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
2.3k
views
Comment: Comment: The number of SVs called by `vg call` is much smaller than the number of SVs in
8 months ago by Jordan M Eizenga ▴ 460
2
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0
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1.2k
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Comment: Comment: How to identify which genome the variations in the pan-genome graph originate fr
8 months ago by Jordan M Eizenga ▴ 460
0
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0
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795
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Comment: Comment: how to compare mapping of WES samples to human pangenome?
8 months ago by Jordan M Eizenga ▴ 460
1
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2
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795
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Comment: Comment: how to compare mapping of WES samples to human pangenome?
8 months ago by Jordan M Eizenga ▴ 460
1
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0
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1.2k
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Comment: Comment: How to identify which genome the variations in the pan-genome graph originate fr
8 months ago by Jordan M Eizenga ▴ 460
1
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1
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1.4k
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Comment: Comment: VG Giraffe multi-mapped reads and definition for MAPQ score
9 months ago by Jordan M Eizenga ▴ 460
1
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0
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2.4k
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Comment: Comment: SV calling using giraffe/vg
9 months ago by Jordan M Eizenga ▴ 460
0
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2
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1.4k
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Comment: Comment: VG Giraffe multi-mapped reads and definition for MAPQ score
9 months ago by Jordan M Eizenga ▴ 460
0
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0
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971
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Comment: Comment: vg map time consuming
9 months ago by Jordan M Eizenga ▴ 460
0
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1
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849
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Comment: Comment: Substantial reduction in read mapping following VG surject
9 months ago by Jordan M Eizenga ▴ 460
1
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0
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986
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Comment: Comment: Indexing the human pangenome draft
9 months ago by Jordan M Eizenga ▴ 460
1
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0
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1.1k
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Comment: Comment: population-level stratagy of vg call
9 months ago by Jordan M Eizenga ▴ 460
0
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1
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1.1k
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Comment: Comment: population-level stratagy of vg call
9 months ago by Jordan M Eizenga ▴ 460
2
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1
reply
1.4k
views
Comment: Comment: VG Giraffe multi-mapped reads and definition for MAPQ score
9 months ago by Jordan M Eizenga ▴ 460
1
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0
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1.0k
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Comment: Comment: Use giraffe in vg
9 months ago by Jordan M Eizenga ▴ 460
1
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2
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971
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Comment: Comment: vg map time consuming
9 months ago by Jordan M Eizenga ▴ 460
1
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1
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971
views
Comment: Comment: vg map time consuming
9 months ago by Jordan M Eizenga ▴ 460
0
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0
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3.6k
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Comment: Comment: Reduce set of chromosomes in Pangenome graph
9 months ago by Jordan M Eizenga ▴ 460
1
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1
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1.0k
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Comment: Comment: Use giraffe in vg
9 months ago by Jordan M Eizenga ▴ 460
0
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0
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919
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Comment: Comment: Construct a pantranscriptome reference with two haplotypes from a single sample.
10 months ago by Jordan M Eizenga ▴ 460
2
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1
reply
919
views
Comment: Comment: Construct a pantranscriptome reference with two haplotypes from a single sample.
10 months ago by Jordan M Eizenga ▴ 460
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