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Comment: Comment: population-level stratagy of vg call
9 months ago by Jordan M Eizenga ▴ 460
2
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1
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1.4k
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Comment: Comment: VG Giraffe multi-mapped reads and definition for MAPQ score
9 months ago by Jordan M Eizenga ▴ 460
1
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0
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1.0k
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Comment: Comment: Use giraffe in vg
9 months ago by Jordan M Eizenga ▴ 460
1
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2
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981
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Comment: Comment: vg map time consuming
9 months ago by Jordan M Eizenga ▴ 460
1
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1
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981
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Comment: Comment: vg map time consuming
9 months ago by Jordan M Eizenga ▴ 460
1
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1
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981
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Answer: Answer: vg map time consuming
9 months ago by Jordan M Eizenga ▴ 460
0
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0
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3.7k
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Comment: Comment: Reduce set of chromosomes in Pangenome graph
9 months ago by Jordan M Eizenga ▴ 460
1
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1
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1.0k
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Comment: Comment: Use giraffe in vg
10 months ago by Jordan M Eizenga ▴ 460
0
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0
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922
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Comment: Comment: Construct a pantranscriptome reference with two haplotypes from a single sample.
10 months ago by Jordan M Eizenga ▴ 460
2
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1
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922
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Comment: Comment: Construct a pantranscriptome reference with two haplotypes from a single sample.
10 months ago by Jordan M Eizenga ▴ 460
0
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0
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1.0k
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Comment: Comment: Use giraffe in vg
10 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
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3
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3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
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1
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940
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Comment: Comment: vg convert does not preserve the order of the reads
10 months ago by Jordan M Eizenga ▴ 460
1
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2
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3.7k
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Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
1
vote
3
replies
3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
759
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Comment: Comment: What is the node_id in vg giraffe output (gaf or gam)?
10 months ago by Jordan M Eizenga ▴ 460
0
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1
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3.7k
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Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
votes
1
reply
3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
2
votes
2
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3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
1
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3
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3.7k
views
Comment: Comment: Reduce set of chromosomes in Pangenome graph
10 months ago by Jordan M Eizenga ▴ 460
0
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1
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532
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Comment: Comment: Retrieving alignment scores with vg surject
10 months ago by Jordan M Eizenga ▴ 460
1
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1
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773
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Comment: Comment: GraphAligner/vg surject - alignment output nonsense?
11 months ago by Jordan M Eizenga ▴ 460
0
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1
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1.1k
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Comment: Comment: RNA Sequencing and Vg pan -transcriptome build
13 months ago by Jordan M Eizenga ▴ 460
1
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1
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2.4k
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Comment: Comment: SV calling using giraffe/vg
15 months ago by Jordan M Eizenga ▴ 460
2
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1
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2.4k
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Comment: Comment: SV calling using giraffe/vg
15 months ago by Jordan M Eizenga ▴ 460
0
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1
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1.2k
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Comment: Comment: vg autoindex - write_gcsa_kmers() size limit exceeded
16 months ago by Jordan M Eizenga ▴ 460
0
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1
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1.2k
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Comment: Comment: vg autoindex - write_gcsa_kmers() size limit exceeded
16 months ago by Jordan M Eizenga ▴ 460
1
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1
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1.2k
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Comment: Comment: vg autoindex - write_gcsa_kmers() size limit exceeded
16 months ago by Jordan M Eizenga ▴ 460
1
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1
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933
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Comment: Comment: vg surject for long reads
23 months ago by Jordan M Eizenga ▴ 460
0
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1
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1.0k
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Answer: Answer: vg for gene presence-absence analysis
2.1 years ago by Jordan M Eizenga ▴ 460
1
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0
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1.5k
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Comment: Comment: vg paired end short read mapping: Best practice?
2.1 years ago by Jordan M Eizenga ▴ 460
0
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1
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1.1k
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Comment: Comment: Combining gcsa indeces for vg
2.3 years ago by Jordan M Eizenga ▴ 460
1
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1
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1.1k
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Answer: Answer: Combining gcsa indeces for vg
2.3 years ago by Jordan M Eizenga ▴ 460
0
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0
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1.1k
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Comment: Comment: vg tools is running, but memory consumption is not happened and log files are no
2.3 years ago by Jordan M Eizenga ▴ 460
0
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1
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1.1k
views
Answer: Answer: vg tools is running, but memory consumption is not happened and log files are no
2.3 years ago by Jordan M Eizenga ▴ 460
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