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2
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1
reply
315
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Answer: Answer: How to parallelize running vg autoindex to create graph references from VCFs wit
7 weeks ago by Jouni Sirén ▴ 360
2
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1
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378
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Answer: Answer: Regarding the node length requirements for using gfa files in vg giraffe
3 months ago by Jouni Sirén ▴ 360
0
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1
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1.2k
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Comment: Comment: build error with vg tools
9 months ago by Jouni Sirén ▴ 360
1
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0
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1.1k
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Comment: Comment: warning[vg::Watchdog]
10 months ago by Jouni Sirén ▴ 360
1
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0
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981
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Answer: Answer: Constructing a vg graph from MSA with a large number of sequences
2.3 years ago by Jouni Sirén ▴ 360
1
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0
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1.1k
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Answer: Answer: vg tools, I ran vg autoindex -w giraffe and use splited vcf file (multi vcf file
2.3 years ago by Jouni Sirén ▴ 360
2
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1
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1.2k
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Answer: Answer: I ran autoindex giraffe of vg tools , Step : Constructing a greedy path cover GB
2.3 years ago by Jouni Sirén ▴ 360
1
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0
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1.6k
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Comment: Comment: Creating a variation graph for Giraffe alignment from assemblies
2.7 years ago by Jouni Sirén ▴ 360
3
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1
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1.6k
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Answer: Answer: Creating a variation graph for Giraffe alignment from assemblies
2.7 years ago by Jouni Sirén ▴ 360
2
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1
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957
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Answer: Answer: VG Installation with Ubuntu
2.7 years ago by Jouni Sirén ▴ 360
2
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0
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2.1k
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Answer: Answer: How to run vg giraffe for sv genotyping?
2.8 years ago by Jouni Sirén ▴ 360
0
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1
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1.2k
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Comment: Comment: Issue with memory and the gcsa index in toil-vg
2.9 years ago by Jouni Sirén ▴ 360
1
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0
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1.1k
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Answer: A: vg index memory allocation
3.3 years ago by Jouni Sirén ▴ 360
0
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2
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1.2k
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Answer: A: In 'vg construct', is it possible to have the variant paths be labeled with sam
3.4 years ago by Jouni Sirén ▴ 360
2
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0
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1.4k
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Answer: A: Issues calling variants with vg when using other tools upstream
3.4 years ago by Jouni Sirén ▴ 360
1
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0
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1.3k
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Answer: A: vg gam file statistics: how many reads are mapped
3.5 years ago by Jouni Sirén ▴ 360
1
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0
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1.6k
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Answer: A: vg path associated with sample name
3.5 years ago by Jouni Sirén ▴ 360
3
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1
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804
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Answer: A: Best way to obtain reference and non-reference k-mer
3.8 years ago by Jouni Sirén ▴ 360
2
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1
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1.0k
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Answer: A: Vg gamsort temporary folder
3.8 years ago by Jouni Sirén ▴ 360
2
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0
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1.4k
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Answer: A: Extract linear representation of paths in VG graph
4.1 years ago by Jouni Sirén ▴ 360
0
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0
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1.1k
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Comment: C: More haplotype threads than expected
4.3 years ago by Jouni Sirén ▴ 360
3
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0
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1.3k
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Answer: A: Error in vg : vg Assertion `reference_for.count(fasta_contig)' failed.
4.4 years ago by Jouni Sirén ▴ 360
2
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0
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1.2k
views
Answer: A: How much memory do we need for pruning a variation graph of a chromosome?
4.6 years ago by Jouni Sirén ▴ 360
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