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Comment: C: basic experimental methods book for bioinformaticians
6.5 years ago by h.mon 35k
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Comment: C: (edgeR-related) DGElist error message 'Negative counts not allowed'.
6.5 years ago by h.mon 35k
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12k
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Answer: A: (edgeR-related) DGElist error message 'Negative counts not allowed'.
6.5 years ago by h.mon 35k
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13k
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Comment: C: Hardware requirement for RNA-seq
6.5 years ago by h.mon 35k
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Answer: A: Microarray analysis in R (Limma): how to select genes exclusively expressed in o
6.5 years ago by h.mon 35k
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3.6k
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Comment: C: Kallisto "pseudo" output to counts/expression matrix
6.5 years ago by h.mon 35k
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5.7k
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Comment: C: Is there any benefit in sorting a sam/bam file by coordinates vs. queryname?
6.5 years ago by h.mon 35k
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3.1k
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Answer: A: Clumpify Input via Process Substitution
6.5 years ago by h.mon 35k
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2.1k
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Answer: A: How to Align to multiple reference genomes -> Discard multiply mapped reads?
6.6 years ago by h.mon 35k
1
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5.7k
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Comment: C: Is there any benefit in sorting a sam/bam file by coordinates vs. queryname?
6.6 years ago by h.mon 35k
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1.9k
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Answer: A: BWA error when aligning multiple files
6.6 years ago by h.mon 35k
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1
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5.7k
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Comment: C: Is there any benefit in sorting a sam/bam file by coordinates vs. queryname?
6.6 years ago by h.mon 35k
6
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1
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5.7k
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Answer: A: Is there any benefit in sorting a sam/bam file by coordinates vs. queryname?
6.6 years ago by h.mon 35k
1
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1
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3.6k
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Answer: A: Kallisto "pseudo" output to counts/expression matrix
6.6 years ago by h.mon 35k
2
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3.3k
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Answer: A: blastn output format with full subject's sequence
6.6 years ago by h.mon 35k
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1.9k
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Comment: C: Microarray data analysis
6.6 years ago by h.mon 35k
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2.4k
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Answer: Answer: Is DAVID an over-representation (ORA) tool for pathway analysis
6.6 years ago by h.mon 35k
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22k
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Comment: C: DESeq2 and integers values
6.6 years ago by h.mon 35k
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3.3k
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Comment: C: Alternatives to RepeatModeler / nseg install fail
6.6 years ago by h.mon 35k
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22k
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Comment: C: DESeq2 and integers values
6.6 years ago by h.mon 35k
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22k
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Answer: A: DESeq2 and integers values
6.6 years ago by h.mon 35k
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22k
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Comment: C: DESeq2 and integers values
6.6 years ago by h.mon 35k
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4.7k
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Comment: C: combining phylogenetic trees into a consensus super Tree
6.6 years ago by h.mon 35k
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1
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3.3k
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Comment: C: Alternatives to RepeatModeler / nseg install fail
6.6 years ago by h.mon 35k
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2.7k
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Comment: C: How extract the longest overlap?
6.6 years ago by h.mon 35k
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1.9k
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Comment: C: Microarray data analysis
6.6 years ago by h.mon 35k
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1
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3.2k
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Comment: C: How does a physics phd approach bioinformatics with a focus on machine learning?
6.6 years ago by h.mon 35k
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4.5k
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Answer: A: TPM and TMM, which should I use for clustering?
6.6 years ago by h.mon 35k
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1.9k
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Comment: C: Microarray data analysis
6.6 years ago by h.mon 35k
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3.9k
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Answer: A: STAR - multi-mapping reads cut off
6.6 years ago by h.mon 35k
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1.7k
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Comment: C: Do I need to trim adapters and remove PE contaminators for mate-pair libraries b
6.6 years ago by h.mon 35k
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1
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1.7k
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Answer: A: Do I need to trim adapters and remove PE contaminators for mate-pair libraries b
6.6 years ago by h.mon 35k
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1
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4.1k
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Answer: C: Might @PG headers affect downstream analyses, and how can I safely remove them f
6.6 years ago by h.mon 35k
4
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2
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5.6k
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Answer: A: Converting this matrix to gene level read counts
6.6 years ago by h.mon 35k
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1
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4.3k
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Comment: C: awk or/and cut command for reformatting sequence header identifiers of fastq fil
6.6 years ago by h.mon 35k
1
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1
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7.9k
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Comment: C: What sequences should I use for ATAC-Seq adapter trimming using trimmomatic 0.36
6.6 years ago by h.mon 35k
2
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1
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4.3k
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Comment: C: awk or/and cut command for reformatting sequence header identifiers of fastq fil
6.6 years ago by h.mon 35k
1
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1
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5.6k
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Comment: C: collapsing transcript expression to gene-level expression
6.6 years ago by h.mon 35k
1
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5.6k
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Comment: C: collapsing transcript expression to gene-level expression
6.6 years ago by h.mon 35k
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5.6k
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Comment: C: Converting this matrix to gene level read counts
6.6 years ago by h.mon 35k
0
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1
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4.0k
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Comment: C: Using the Correct Ensembl Organism Database in topGO in R
6.6 years ago by h.mon 35k
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1
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5.6k
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Comment: C: Converting this matrix to gene level read counts
6.6 years ago by h.mon 35k
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4.3k
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Answer: A: SRA tool kit 2.9.4
6.6 years ago by h.mon 35k
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0
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2.0k
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Answer: A: Extract 10 matches in BLAST
6.6 years ago by h.mon 35k
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4.0k
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Answer: A: Using the Correct Ensembl Organism Database in topGO in R
6.6 years ago by h.mon 35k
1
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1
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3.6k
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Comment: C: Error upon running HTseq with paired end aligned BAM (coordinate sorted) files
6.6 years ago by h.mon 35k
1
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0
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3.6k
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Comment: C: Error upon running HTseq with paired end aligned BAM (coordinate sorted) files
6.6 years ago by h.mon 35k
1
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0
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4.8k
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Comment: C: Normal to have high variability in Broad Institute's GSEA Output?
6.6 years ago by h.mon 35k
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3.6k
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Answer: A: Error upon running HTseq with paired end aligned BAM (coordinate sorted) files
6.6 years ago by h.mon 35k
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0
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4.5k
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Comment: C: How to run Trinotate
6.6 years ago by h.mon 35k
4,239 results • Page 21 of 85
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