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Parse ncbiRefSeq (other like) annotations
refseq
updated 16 months ago by ★ 3.6k • written 16 months ago by ▴ 330
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Comment: Comment: jellyfish count discrepancy between results obtained with and without -C optio
21 months ago by onestop_data ▴ 330
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2.1k
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Comment: Comment: BAM to Fastq
21 months ago by onestop_data ▴ 330
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16k
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Answer: Answer: How to count fasta sequences efficiently using (or not ) biopython
21 months ago by onestop_data ▴ 330
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11k
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Answer: Answer: Is There An Easy Way To Properly Orient Sequences For Clustalw Alignment?
21 months ago by onestop_data ▴ 330
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1.1k
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Answer: Answer: K-mer usage in metagenome assemblies
2.5 years ago by onestop_data ▴ 330
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2.6k
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Answer: Answer: Downsampling fastq reads
2.5 years ago by onestop_data ▴ 330
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1.4k
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Comment: C: Multiple sequence alignment clean-up
3.4 years ago by onestop_data ▴ 330
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1.4k
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Answer: A: Multiple sequence alignment clean-up
3.4 years ago by onestop_data ▴ 330
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2.4k
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Comment: C: Binning tools for metagenomics
3.5 years ago by onestop_data ▴ 330
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2.4k
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Answer: A: Binning tools for metagenomics
3.5 years ago by onestop_data ▴ 330
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2.8k
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Answer: A: metabat installation problem with conda
3.5 years ago by onestop_data ▴ 330
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2.5k
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Answer: A: Genome size estimation using Kmergenie
3.5 years ago by onestop_data ▴ 330
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1.1k
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Answer: A: Cross assembly of metagenomics
3.6 years ago by onestop_data ▴ 330
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4.7k
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Answer: A: Reads Simulation and Read Simulator
3.6 years ago by onestop_data ▴ 330
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2.7k
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Answer: A: Paired-end metagenomics data for MEGAN analysis
3.6 years ago by onestop_data ▴ 330
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1.6k
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Comment: C: Taxonomic analysis of metagenomic data
3.6 years ago by onestop_data ▴ 330
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1.4k
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Answer: A: MetaBat 2 does not produce a bin while running ok
3.6 years ago by onestop_data ▴ 330
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680
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Answer: A: Sequences alignment program
3.6 years ago by onestop_data ▴ 330
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1.5k
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Comment: C: Virsorter running error
3.6 years ago by onestop_data ▴ 330
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4.0k
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Answer: A: How to calculate the entropy of a DNA sequence - and/or it's complexity
3.6 years ago by onestop_data ▴ 330
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818
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Answer: A: Plasmid and Phage identification package
3.6 years ago by onestop_data ▴ 330
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1.5k
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Answer: A: Virsorter running error
3.6 years ago by onestop_data ▴ 330
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1.0k
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Answer: A: Functional Metagenomic Analysis Tools
3.6 years ago by onestop_data ▴ 330
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1.1k
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Comment: C: How can I discover gene function on a bacterial genome
3.6 years ago by onestop_data ▴ 330
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1.1k
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Comment: C: How can I discover gene function on a bacterial genome
3.6 years ago by onestop_data ▴ 330
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1.1k
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Answer: A: How can I discover gene function on a bacterial genome
3.6 years ago by onestop_data ▴ 330
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3.5k
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Answer: A: convert gbk to fasta
3.6 years ago by onestop_data ▴ 330
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1.0k
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Answer: A: How to functional annotation bins (the output of MaxBin) of metagenomics
3.7 years ago by onestop_data ▴ 330
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2.2k
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Comment: C: bioinformatics tool for COG assignment
3.7 years ago by onestop_data ▴ 330
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2.5k
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Answer: A: Check contamination in assembly
3.7 years ago by onestop_data ▴ 330
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1
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2.2k
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Answer: A: bioinformatics tool for COG assignment
3.7 years ago by onestop_data ▴ 330
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1.5k
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Answer: A: How to assemble viral genomes when my data contains host DNA as well
3.7 years ago by onestop_data ▴ 330
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1
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3.7k
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Answer: A: kraken2-build command not found
3.7 years ago by onestop_data ▴ 330
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7.2k
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Answer: A: Problem with Prokka to run tbl2asn
3.7 years ago by onestop_data ▴ 330
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1
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2.2k
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Answer: A: construction of draft genome from the contigs
3.7 years ago by onestop_data ▴ 330
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1.5k
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Answer: A: Kraken_results or Kraken_report? Which file to consider ?
3.7 years ago by onestop_data ▴ 330
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745
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Answer: A: Metagenomics Analysis Pipeline
3.7 years ago by onestop_data ▴ 330
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1.9k
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Answer: A: Getting length of every interval in a bed file
3.7 years ago by onestop_data ▴ 330
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1.9k
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Comment: C: There are any way to use a script for feed emboss with fasta sequence?
3.7 years ago by onestop_data ▴ 330
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1
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1.9k
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Comment: C: There are any way to use a script for feed emboss with fasta sequence?
3.7 years ago by onestop_data ▴ 330
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1.8k
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Answer: A: bcftools sec for multiple files
3.7 years ago by onestop_data ▴ 330
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1.8k
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Comment: C: minimap2 cigar entry
3.7 years ago by onestop_data ▴ 330
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1.0k
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Comment: C: Functional Metagenomic Analysis Tools
3.7 years ago by onestop_data ▴ 330
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756
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Answer: A: ABySS Bloom filter false positive rate
3.7 years ago by onestop_data ▴ 330
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1.1k
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Answer: A: Extracting Multiple Mapped reads from Bismark output
3.7 years ago by onestop_data ▴ 330
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886
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Comment: C: How do I summarize coverage across many genomes to inform filtering cutoffs?
3.7 years ago by onestop_data ▴ 330
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886
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Answer: A: How do I summarize coverage across many genomes to inform filtering cutoffs?
3.7 years ago by onestop_data ▴ 330
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2.7k
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Answer: A: problem with installing and running bcftools
3.7 years ago by onestop_data ▴ 330
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1.7k
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Comment: C: Calculate coverage from SAM file
3.7 years ago by onestop_data ▴ 330
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