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1
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0
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1.2k
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Answer: A: Is there some good software to align/compare fasta sequences in my PC
4.9 years ago by predeus ★ 2.0k
0
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0
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836
views
Answer: A: Looking for the best plot for overlapping features
4.9 years ago by predeus ★ 2.0k
4
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0
replies
6.7k
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Answer: A: How to circularize genome assemblies
5.0 years ago by predeus ★ 2.0k
0
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0
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7.3k
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Comment: C: Batch effect correction
5.0 years ago by predeus ★ 2.0k
0
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0
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3.4k
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Comment: C: Is computing TPM from read count from DEseq2 count matrix necessary?
5.0 years ago by predeus ★ 2.0k
1
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0
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1.8k
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Answer: A: When will the HG 19/ GRC37 finally become obsolete
5.0 years ago by predeus ★ 2.0k
1
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0
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5.6k
views
Answer: A: which matrix should be used to draw heatmap in RNAseq?
5.0 years ago by predeus ★ 2.0k
0
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0
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1.4k
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Comment: C: Interpretation of several pairwise overlaps
5.1 years ago by predeus ★ 2.0k
0
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0
replies
1.1k
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Answer: A: Number of genes in a kegg pathway
5.1 years ago by predeus ★ 2.0k
0
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1
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3.1k
views
Comment: A: .sra to bam conversion results in a "< myfile > does not have BAM or CRAM format
5.1 years ago by predeus ★ 2.0k
2
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0
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3.4k
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Answer: A: Is computing TPM from read count from DEseq2 count matrix necessary?
5.1 years ago by predeus ★ 2.0k
1
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0
replies
1.4k
views
Comment: C: htseq-count cannot locate gff
5.1 years ago by predeus ★ 2.0k
1
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0
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3.9k
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Answer: A: Hybrid assembly using MinION data + correction with Illumina. Which strategy to
5.1 years ago by predeus ★ 2.0k
0
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1
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1.4k
views
Answer: A: Interpretation of several pairwise overlaps
5.1 years ago by predeus ★ 2.0k
0
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1
reply
1.4k
views
Comment: C: htseq-count cannot locate gff
5.1 years ago by predeus ★ 2.0k
5
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1
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7.3k
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Answer: A: Batch effect correction
5.1 years ago by predeus ★ 2.0k
2
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0
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2.3k
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Answer: A: plasmid recovery from hybrid assembly
5.1 years ago by predeus ★ 2.0k
1
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0
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12k
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Comment: C: Modern software for whole genome alignment visualization
5.1 years ago by predeus ★ 2.0k
25
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25
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12k
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11 follow
Modern software for whole genome alignment visualization
visualization whole-genome alignment mauve harvest
updated 5.1 years ago by • 0 • written 6.3 years ago by ★ 2.0k
0
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0
replies
892
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Answer: A: Best way to search for presence of gene in whole genome of related species
5.1 years ago by predeus ★ 2.0k
0
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1
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2.0k
views
Answer: A: How to find correspondence between GSM and all SRA identifiers (SRR DRR ERR) ?
5.1 years ago by predeus ★ 2.0k
1
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0
replies
2.0k
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Comment: C: Programs for bacterial gene prediction/annotation for nanopore assembly?
5.1 years ago by predeus ★ 2.0k
1
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1
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2.0k
views
Comment: C: Programs for bacterial gene prediction/annotation for nanopore assembly?
5.1 years ago by predeus ★ 2.0k
3
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1
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2.0k
views
Answer: A: Programs for bacterial gene prediction/annotation for nanopore assembly?
5.1 years ago by predeus ★ 2.0k
16
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7
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10k
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Get a complete GSM-to-SRX/SRR table
GEO SRA GSM GSE SRAdb
updated 5.1 years ago by ▴ 60 • written 7.2 years ago by ★ 2.0k
0
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0
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4.3k
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Comment: C: Combining HMMs and fasta for HMMER searches
5.1 years ago by predeus ★ 2.0k
12
votes
6
replies
8.8k
views
Racon-Illumina or Pilon?
Assembly nanopore polishing
updated 5.2 years ago by ▴ 40 • written 6.1 years ago by ★ 2.0k
0
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0
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6.2k
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Comment: C: STAR for bacterial genome
5.2 years ago by predeus ★ 2.0k
1
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0
replies
6.2k
views
Answer: A: Is There A Tool To Visualize Sequence Graphs?
5.3 years ago by predeus ★ 2.0k
0
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0
replies
6.2k
views
Comment: C: STAR for bacterial genome
5.3 years ago by predeus ★ 2.0k
0
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1
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6.2k
views
Comment: C: STAR for bacterial genome
5.3 years ago by predeus ★ 2.0k
8
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6
replies
2.4k
views
Using Bandage to finish ambiguous long-read assembly?
Assembly Bandage long reads Unicycler
updated 5.4 years ago by 20 • written 5.5 years ago by ★ 2.0k
1
vote
1
reply
16k
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Comment: C: Best RNA-Seq aligner: A comparison of mapping tools
5.4 years ago by predeus ★ 2.0k
3
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2
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16k
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Comment: C: Best RNA-Seq aligner: A comparison of mapping tools
5.4 years ago by predeus ★ 2.0k
1
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0
replies
2.4k
views
Comment: C: Using Bandage to finish ambiguous long-read assembly?
5.4 years ago by predeus ★ 2.0k
0
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0
replies
2.4k
views
Comment: C: Using Bandage to finish ambiguous long-read assembly?
5.4 years ago by predeus ★ 2.0k
1
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1
reply
2.4k
views
Comment: C: Using Bandage to finish ambiguous long-read assembly?
5.4 years ago by predeus ★ 2.0k
1
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0
replies
53k
views
Comment: C: How Can I Convert Bam/Sam To Wiggle
5.6 years ago by predeus ★ 2.0k
0
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0
replies
4.0k
views
Answer: A: What Is The Best Way To Detect Mitochondrial/Chloroplast Genomes From Assembled
5.6 years ago by predeus ★ 2.0k
0
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0
replies
2.9k
views
Comment: C: Where and how NGS techniques are heading for the next 5 years?
5.6 years ago by predeus ★ 2.0k
0
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0
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2.0k
views
Comment: C: What would be the trend in next few years in NGS era?
5.6 years ago by predeus ★ 2.0k
0
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0
replies
1.9k
views
Comment: C: Blocking primer design software?
5.6 years ago by predeus ★ 2.0k
0
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2
replies
1.9k
views
Blocking primer design software?
blocking primers PCR amplification
updated 5.6 years ago by • 0 • written 6.4 years ago by ★ 2.0k
0
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0
replies
1.0k
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Comment: C: Cluster plasmids of (very) different lengths
5.6 years ago by predeus ★ 2.0k
0
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0
replies
1.0k
views
Comment: C: Cluster plasmids of (very) different lengths
5.6 years ago by predeus ★ 2.0k
1
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3
replies
1.0k
views
Cluster plasmids of (very) different lengths
sequence clustering blast
5.6 years ago by predeus ★ 2.0k
5
votes
6
replies
3.5k
views
Best way to assign pfam/EC/COGs to a set of proteins
pfam COG enzyme protein
5.7 years ago by predeus ★ 2.0k
1
vote
0
replies
6.2k
views
Answer: A: Is There A Tool To Visualize Sequence Graphs?
5.7 years ago by predeus ★ 2.0k
0
votes
0
replies
3.6k
views
Answer: A: Are There Any Databases/Knowledge Bases Or Other Resources Concerning Bacterial
5.7 years ago by predeus ★ 2.0k
2
votes
1
reply
5.0k
views
Answer: A: Bacterial GWAS analysis?
5.7 years ago by predeus ★ 2.0k
280 results • Page 4 of 6
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