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Comment: Comment: Convert Gene Ensemble IDs to Gene Symbols on R
19 months ago by Marco Pannone ▴ 790
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Comment: Comment: Convert Gene Ensemble IDs to Gene Symbols on R
19 months ago by Marco Pannone ▴ 790
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1.4k
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Comment: Comment: Convert Gene Ensemble IDs to Gene Symbols on R
19 months ago by Marco Pannone ▴ 790
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Comment: Comment: Change of -t argument in featureCounts affecting annotation
19 months ago by Marco Pannone ▴ 790
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856
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Comment: Comment: Change of -t argument in featureCounts affecting annotation
19 months ago by Marco Pannone ▴ 790
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Comment: Comment: Deeptools comparing heatmap zMin and zMax across different plotHeatmaps
19 months ago by Marco Pannone ▴ 790
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753
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Comment: Comment: Deeptools comparing heatmap zMin and zMax across different plotHeatmaps
19 months ago by Marco Pannone ▴ 790
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Comment: Comment: Unable to install bioconda and bowtie
19 months ago by Marco Pannone ▴ 790
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Comment: Comment: How to convert Ensemble Gene IDs to gene symbols or Entrez Gene IDs?
19 months ago by Marco Pannone ▴ 790
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4.5k
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Comment: Comment: Unable to install bioconda and bowtie
19 months ago by Marco Pannone ▴ 790
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4.5k
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Comment: Comment: Unable to install bioconda and bowtie
19 months ago by Marco Pannone ▴ 790
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642
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Comment: Comment: calling peaks in ChIP-seq datasets from bedgraph files
19 months ago by Marco Pannone ▴ 790
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718
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Comment: Comment: macs callpeak q value cutoff 1 and 0.05 with different peak result
19 months ago by Marco Pannone ▴ 790
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Comment: Comment: trimmomatic
20 months ago by Marco Pannone ▴ 790
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653
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Comment: Comment: Genome indexing
21 months ago by Marco Pannone ▴ 790
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653
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Comment: Comment: Genome indexing
21 months ago by Marco Pannone ▴ 790
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1.1k
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Comment: Comment: PlotHeatmap in deeptools horizontally
21 months ago by Marco Pannone ▴ 790
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1.1k
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Comment: Comment: PlotHeatmap in deeptools horizontally
21 months ago by Marco Pannone ▴ 790
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1.0k
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Comment: Comment: Increased GC content after trimming RNAseq data
21 months ago by Marco Pannone ▴ 790
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1.1k
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Comment: Comment: PlotHeatmap in deeptools horizontally
21 months ago by Marco Pannone ▴ 790
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3.4k
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Comment: Comment: Cut&Run vs ChIP-seq pipeline
22 months ago by Marco Pannone ▴ 790
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3.4k
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Comment: Comment: Cut&Run vs ChIP-seq pipeline
22 months ago by Marco Pannone ▴ 790
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782
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Comment: Comment: Error in DiffBind
22 months ago by Marco Pannone ▴ 790
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Comment: Comment: How to do GO enrichment analysis for Klebsiella pneumonia?
22 months ago by Marco Pannone ▴ 790
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1.1k
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Comment: Comment: Possible rRNA contamination in one sample
23 months ago by Marco Pannone ▴ 790
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1.1k
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Comment: Comment: Possible rRNA contamination in one sample
23 months ago by Marco Pannone ▴ 790
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1.1k
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Comment: Comment: Possible rRNA contamination in one sample
23 months ago by Marco Pannone ▴ 790
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1.1k
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Comment: Comment: Are the top 50 features in heat map for each phenotype in dataset generated by G
23 months ago by Marco Pannone ▴ 790
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1.1k
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Comment: Comment: Are the top 50 features in heat map for each phenotype in dataset generated by G
23 months ago by Marco Pannone ▴ 790
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Comment: Comment: BED file from GSEA gene set
23 months ago by Marco Pannone ▴ 790
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1.8k
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Comment: Comment: Bulk RNA seq: all p adjusted are the same
23 months ago by Marco Pannone ▴ 790
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2.2k
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Comment: Comment: How to learn bioinformatics?
23 months ago by Marco Pannone ▴ 790
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991
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Comment: Comment: GSEA not returning significant gene sets
23 months ago by Marco Pannone ▴ 790
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565
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Comment: Comment: How to search and identify the function of DEGs
23 months ago by Marco Pannone ▴ 790
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565
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Comment: Comment: How to search and identify the function of DEGs
23 months ago by Marco Pannone ▴ 790
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785
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Comment: Comment: Merge featurecounts lists
24 months ago by Marco Pannone ▴ 790
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665
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Comment: Comment: Comparing overrepresented sequences from fastqc.txt file
24 months ago by Marco Pannone ▴ 790
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683
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Comment: Comment: Aggregation of bulk RNA-seq
24 months ago by Marco Pannone ▴ 790
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701
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Comment: Comment: Merging a low quality run of a sample with a high quality run (RNAseq)
2.1 years ago by Marco Pannone ▴ 790
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701
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Comment: Comment: Merging a low quality run of a sample with a high quality run (RNAseq)
2.1 years ago by Marco Pannone ▴ 790
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Comment: Comment: concatenated datasets for HISAT2 alignment
2.1 years ago by Marco Pannone ▴ 790
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2.5k
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Comment: Comment: Error with per tile sequence quality (by FastQC)
2.1 years ago by Marco Pannone ▴ 790
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1
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2.5k
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Comment: Comment: Error with per tile sequence quality (by FastQC)
2.1 years ago by Marco Pannone ▴ 790
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1
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2.7k
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Comment: Comment: make a BED file with exons only
2.1 years ago by Marco Pannone ▴ 790
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2.5k
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Comment: Comment: Error with per tile sequence quality (by FastQC)
2.1 years ago by Marco Pannone ▴ 790
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588
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Comment: Comment: What does it mean by local structure?
2.1 years ago by Marco Pannone ▴ 790
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3.0k
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Comment: Comment: Can I convert HTSeq count into RPKM or TPM value or standard unit of RNA-Seq
2.1 years ago by Marco Pannone ▴ 790
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3.0k
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Comment: Comment: Can I convert HTSeq count into RPKM or TPM value or standard unit of RNA-Seq
2.1 years ago by Marco Pannone ▴ 790
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857
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Comment: Comment: Bowtie produced empty .sam file
2.1 years ago by Marco Pannone ▴ 790
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3.0k
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Comment: Comment: Can I convert HTSeq count into RPKM or TPM value or standard unit of RNA-Seq
2.1 years ago by Marco Pannone ▴ 790
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