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7
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4.7k
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Answer: A: Detecting highly variable genes within replicates
5.2 years ago by Michele Busby ★ 2.2k
3
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0
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1.8k
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Answer: A: HLA Typing understanding
5.7 years ago by Michele Busby ★ 2.2k
3
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0
replies
1.7k
views
Answer: A: Statistical test for replicates
5.8 years ago by Michele Busby ★ 2.2k
0
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0
replies
6.8k
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Answer: A: fastq- dump error
5.9 years ago by Michele Busby ★ 2.2k
1
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0
replies
1.4k
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Answer: A: RSEM build for C. elegans
5.9 years ago by Michele Busby ★ 2.2k
4
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0
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1.8k
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Answer: A: quantification RNAseq and normalization
6.0 years ago by Michele Busby ★ 2.2k
0
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0
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2.7k
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Answer: A: How to remove the RIN (RNA integrity number) effect for RNA-seq data?
6.0 years ago by Michele Busby ★ 2.2k
4
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0
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2.8k
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Answer: A: Can I add TPM values of Isoforms of the same gene to get total gene expression?
6.2 years ago by Michele Busby ★ 2.2k
2
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1
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1.4k
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Answer: A: Sub-typing patients by a single gene's expression in TCGA dataset.
6.3 years ago by Michele Busby ★ 2.2k
2
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0
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3.8k
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Answer: A: RSEM RNAseq - comparison between samples
6.5 years ago by Michele Busby ★ 2.2k
0
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0
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1.8k
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Answer: A: Are a Large Number of Biological Replicates Ever an Acceptable Replacement for T
6.6 years ago by Michele Busby ★ 2.2k
2
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1
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4.2k
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Answer: A: Differential expression for two very different samples
6.8 years ago by Michele Busby ★ 2.2k
1
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1
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2.6k
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Answer: A: IP efficiency in Chip-Seq data
7.0 years ago by Michele Busby ★ 2.2k
1
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1
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3.8k
views
Answer: A: Small RNA-seq experimental design, which one is better?
7.0 years ago by Michele Busby ★ 2.2k
4
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1
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2.4k
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Answer: A: Research advice needed
7.2 years ago by Michele Busby ★ 2.2k
6
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1
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9.3k
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Answer: A: Chip-Seq merging peak files
7.3 years ago by Michele Busby ★ 2.2k
0
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1
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1.9k
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Answer: A: Should we normalize different numbers of reads?
7.3 years ago by Michele Busby ★ 2.2k
0
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1
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3.6k
views
Answer: A: RNAseq read depth
7.4 years ago by Michele Busby ★ 2.2k
3
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2
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4.4k
views
Answer: A: Using rnaseq reference sample across batches
7.4 years ago by Michele Busby ★ 2.2k
1
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1
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1.9k
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Answer: A: A question about RNASeq experiment design
7.5 years ago by Michele Busby ★ 2.2k
0
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0
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2.2k
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Answer: A: non-exonic reads in RNAseq
7.9 years ago by Michele Busby ★ 2.2k
1
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1
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2.7k
views
Answer: A: Public paired end chip seq dataset, both ChIP and input?
7.9 years ago by Michele Busby ★ 2.2k
5
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2
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8.7k
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Answer: A: ChIP seq- input DNA control for normalization
8.2 years ago by Michele Busby ★ 2.2k
0
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0
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4.1k
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Answer: A: RSEM failed on miRNA read dataset
8.6 years ago by Michele Busby ★ 2.2k
2
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1
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2.1k
views
Answer: Answer: Joint analysis of public RNA-seq samples coming from different extraction protoc
updated 20 months ago by 43k • written 8.6 years ago by ★ 2.2k
1
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0
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1.8k
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Answer: Answer: qulity control of RNA-seq results
updated 15 months ago by 43k • written 9.0 years ago by ★ 2.2k
4
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1
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6.0k
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Answer: A: Is Smith Waterman ever used?
9.0 years ago by Michele Busby ★ 2.2k
2
votes
0
replies
2.9k
views
Answer: Answer: RNA-seq: how big should be the library?
updated 22 months ago by 43k • written 9.0 years ago by ★ 2.2k
1
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1
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5.9k
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Answer: Answer: How stranded is stranded RNA-Seq (TruSeq) protocol?
updated 23 months ago by 43k • written 9.1 years ago by ★ 2.2k
6
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0
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18k
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Answer: Answer: How Do I Get Started Working With Rna-Seq Data
updated 23 months ago by 43k • written 9.1 years ago by ★ 2.2k
0
votes
0
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6.7k
views
Answer: Answer: How to remove probably ribosomal RNA in mRNA-seq data derived from Illumina sequ
updated 24 months ago by 43k • written 9.2 years ago by ★ 2.2k
0
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0
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4.1k
views
Answer: Answer: Quality control & Processing of RNA seq data
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.2k
0
votes
0
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4.6k
views
Answer: A: How to import a big matrix into matlab?
9.5 years ago by Michele Busby ★ 2.2k
2
votes
0
replies
3.6k
views
Answer: Answer: What are the differences between RNA-Seq and Single Cell RNA Seq with respect to
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.2k
1
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1
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20k
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Answer: A: Advice on RNASeq analysis without biological replicates for differential gene ex
9.5 years ago by Michele Busby ★ 2.2k
5
votes
0
replies
14k
views
Answer: Answer: ChIP-Seq: Calling peaks with replicates
updated 2.3 years ago by 43k • written 9.6 years ago by ★ 2.2k
1
vote
0
replies
4.5k
views
Answer: Answer: Robustness Of Deseq For Differential Expression Analysis For Rna Seq Data
updated 2.4 years ago by 43k • written 9.8 years ago by ★ 2.2k
3
votes
0
replies
2.2k
views
Answer: Answer: Coverage for sample with many species
updated 2.5 years ago by 43k • written 9.8 years ago by ★ 2.2k
1
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1
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3.3k
views
Answer: Answer: RNA-Seq library types
updated 2.5 years ago by 43k • written 9.9 years ago by ★ 2.2k
0
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0
replies
32k
views
Answer: Answer: Which Bioinformatic Friendly Pipeline Building Framework?
updated 2.3 years ago by 43k • written 10.3 years ago by ★ 2.2k
5
votes
1
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3.3k
views
Answer: A: Is It Possible For Orthologous Genes To Exist In One Member Of A Species But Not
10.3 years ago by Michele Busby ★ 2.2k
2
votes
1
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9.2k
views
Answer: A: Rna-Seq: Treat Samples As Biological Replicates?
10.3 years ago by Michele Busby ★ 2.2k
4
votes
1
reply
5.3k
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Answer: A: Differential Expression Using Different Libraries (Truseq, Nextera)?
10.5 years ago by Michele Busby ★ 2.2k
0
votes
1
reply
11k
views
Answer: C: Cost-Effective Online Certificate Programs In Bioinformatics / Biostatistics / A
10.5 years ago by Michele Busby ★ 2.2k
1
vote
0
replies
5.1k
views
Answer: A: What Are The Best Qc Tools For Exome Seq, Rna Seq, Single/Paired End, Etc?
10.5 years ago by Michele Busby ★ 2.2k
29
votes
1
reply
40k
views
Answer: A: Why Does Rna-Seq Read Count Fit Poisson Distribution?
10.5 years ago by Michele Busby ★ 2.2k
1
vote
1
reply
4.0k
views
Answer: A: Bioinfomatics Graduate Programs (Specifically Good Research Groups) In Europe
10.5 years ago by Michele Busby ★ 2.2k
1
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1
reply
4.2k
views
Answer: A: Rnaseq Library Quantification
10.6 years ago by Michele Busby ★ 2.2k
5
votes
0
replies
7.3k
views
Answer: A: Why Do We Normalize For Gc Counts And Not For At Counts When Computing Gene Expr
10.6 years ago by Michele Busby ★ 2.2k
12
votes
0
replies
8.2k
views
Answer: A: What Is The Best Tool For Power Analysis For An Rna-Seq Experimental Design
updated 10.9 years ago by 24k • written 10.9 years ago by ★ 2.2k
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