User: liux.bio

gravatar for liux.bio
liux.bio340
Reputation:
340
Status:
Trusted
Location:
China
Last seen:
2 months, 1 week ago
Joined:
7 years ago
Email:
l*******@gmail.com

Posts by liux.bio

<prev • 42 results • page 1 of 5 • next >
0
votes
0
answers
568
views
0
answers
Ask for suggestions of filtering probes in affymetrix data
... Hi, biostars. I am analyzing an affymetrix microarray [ dataset][1]. After searching, I found following blogs about filtering probes: - [Question: filtering probes in affymetrix data][2] - [Question: Filtering before differential expression analysis of microarrays - New paper out][3] - [Questio ...
microarray affymetrix written 14 months ago by liux.bio340 • updated 11 months ago by Biostar ♦♦ 20
0
votes
1
answer
446
views
1
answers
Comment: C: Could not reproduce the results (MA-plot) in the paper when analyzing two-color
... Many thanks for your clear answer. I will have a try. ...
written 15 months ago by liux.bio340
4
votes
1
answer
446
views
1
answer
Could not reproduce the results (MA-plot) in the paper when analyzing two-color Microarray data with Limma.
... Hi, biostars, I am using Limma package to analyze a chip-on-chip [data set][1] generated by Mouse PromoterChip 5A.0 arrays. The arrays are two-color Microarray. The protocol the author used are as follows: > Extracted raw data were filtered and normalized using "normexp" method from the Limma p ...
R microarray limma written 15 months ago by liux.bio340 • updated 15 months ago by ATpoint36k
0
votes
0
answers
1.0k
views
0
answers
Tool: PPIExp: a web-based platform for visualizing dynamic protein-protein interaction networks (active PPI subnetworks )
... ##Overview## In a cell, proteins function in different space and time through interacting with different partners. Intuitively visualizing the active PPI subnetworks in specific space or time can help researchers discover key proteins for further study. We developed [PPIExp][1], a web-based platform ...
interactive visualization dynamic ppi networks tool written 17 months ago by liux.bio340
0
votes
1
answer
495
views
1
answers
Answer: A: question about TF enrichment analysis
... For TFs enrichment analysis, you can try [homer][1] [1]: http://homer.ucsd.edu/homer/motif/motifDatabase.html ...
written 17 months ago by liux.bio340
0
votes
2
answers
6.2k
views
2
answers
Comment: C: How to map and visualize differentially expressed genes on KEGG pathways
... You can follow the [tutorial][1] [1]: http://www.fgvis.com/expressvis/tutorial ...
written 17 months ago by liux.bio340
0
votes
0
answers
671
views
0
answers
How to predict receptors of a ligand?
... Hi, Biostars. I want to predict the receptors of a ligand. Are there any tools I can use? or any suggestions? ...
receptor prediction written 22 months ago by liux.bio340
0
votes
2
answers
564
views
2
answers
Answer: A: Transcription Factors in common
... You can try [iRegulon][1], which is a cytoscape app. [1]: http://apps.cytoscape.org/apps/iregulon ...
written 2.1 years ago by liux.bio340
0
votes
0
answers
433
views
0
answers
Comment: C: displaying graphs in R
... You can try [ggplot2][1]. [1]: https://ggplot2.tidyverse.org/ ...
written 2.1 years ago by liux.bio340
0
votes
3
answers
2.1k
views
3
answers
Comment: C: How to build a bioinformatics server
... ## First one ## For the first question. I agree with you, Js and Django are different. But I think we can learn two techniques at the same time. ## Second one ## As for combining Django and Angular. I mean that when we develop the app, we use Angular to develop front-end and use Django develop the b ...
written 2.1 years ago by liux.bio340

Latest awards to liux.bio

Popular Question 19 months ago, created a question with more than 1,000 views. For How to filter out the non-coding genes?
Good Answer 2.1 years ago, created an answer that was upvoted at least 5 times. For A: How to build a bioinformatics server
Teacher 2.1 years ago, created an answer with at least 3 up-votes. For A: How can i do enrichment analysis more precisely for differential expression anal
Teacher 2.1 years ago, created an answer with at least 3 up-votes. For A: How can i do enrichment analysis more precisely for differential expression anal
Popular Question 3.6 years ago, created a question with more than 1,000 views. For How to filter out the non-coding genes?
Popular Question 4.8 years ago, created a question with more than 1,000 views. For How To Use Clusgap() When The Cluster Method Is Hierarchical Clustering?
Popular Question 4.8 years ago, created a question with more than 1,000 views. For How To Get Tissue-Specific Protein-Protein Interactions?
Popular Question 5.8 years ago, created a question with more than 1,000 views. For How To Use Clusgap() When The Cluster Method Is Hierarchical Clustering?

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1246 users visited in the last hour