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Answer: Answer: Pathway enrichment analysis
2.2 years ago by liux.bio ▴ 370
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4.8k
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Answer: Answer: KEGG pathway maps
2.2 years ago by liux.bio ▴ 370
1
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1.9k
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Answer: Answer: GSEA analysis and pathway mapping
2.2 years ago by liux.bio ▴ 370
3
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5
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5.2k
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How to filter out the non-coding genes?
bioconductor genome
updated 4.0 years ago by 45k • written 11.3 years ago by ▴ 370
0
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1
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2.3k
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Ask for suggestions of filtering probes in affymetrix data
microarray Affymetrix
updated 6.1 years ago by 20 • written 6.3 years ago by ▴ 370
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0
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1.7k
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Comment: C: Could not reproduce the results (MA-plot) in the paper when analyzing two-color
6.4 years ago by liux.bio ▴ 370
4
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2
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1.7k
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Could not reproduce the results (MA-plot) in the paper when analyzing two-color Microarray data with Limma.
R Microarray limma
updated 6.4 years ago by 89k • written 6.4 years ago by ▴ 370
0
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0
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2.7k
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Tool: PPIExp: a web-based platform for visualizing dynamic protein-protein interaction networks (active PPI subnetworks )
interactive-visualization Dynamic-PPI-networks
updated 2.3 years ago by 45k • written 6.6 years ago by ▴ 370
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0
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1.7k
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Answer: A: question about TF enrichment analysis
6.6 years ago by liux.bio ▴ 370
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0
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10k
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Comment: C: How to map and visualize differentially expressed genes on KEGG pathways
6.6 years ago by liux.bio ▴ 370
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0
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10k
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Answer: A: How to map and visualize differentially expressed genes on KEGG pathways
6.7 years ago by liux.bio ▴ 370
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0
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2.8k
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Answer: A: stringDB PPI network with Log fold change?
6.8 years ago by liux.bio ▴ 370
0
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1
reply
1.7k
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How to predict receptors of a ligand?
receptor prediction
7.0 years ago by liux.bio ▴ 370
4
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3
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6.6k
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Tool: KeggExp: a web server for visualizing KEGG pathways maps when analyzing expression profile data
expression-profile-data pathway-visualization
2.2 years ago by liux.bio ▴ 370
18
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2
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8.4k
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Answer: A: How to build a bioinformatics server
7.1 years ago by liux.bio ▴ 370
0
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0
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1.8k
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Answer: A: Transcription Factors in common
7.2 years ago by liux.bio ▴ 370
0
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1
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1.5k
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Comment: C: displaying graphs in R
7.2 years ago by liux.bio ▴ 370
0
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1
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8.4k
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Comment: C: How to build a bioinformatics server
7.2 years ago by liux.bio ▴ 370
3
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0
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2.2k
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Answer: A: How can i do enrichment analysis more precisely for differential expression anal
7.3 years ago by liux.bio ▴ 370
0
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0
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6.1k
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Answer: A: Map gene list to pathway and visualize it
7.3 years ago by liux.bio ▴ 370
0
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1
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6.6k
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Comment: C: KeggExp: a web server for visualizing KEGG pathways maps when analyzing expressi
7.3 years ago by liux.bio ▴ 370
28
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6
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41k
views
6 follow
How To Get The Subclusters From The Object Of Hclust() Using Cutree() According To The Order On The Map Produced By Heatmap.2?
updated 7.6 years ago by ▴ 160 • written 11.9 years ago by ▴ 370
1
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4
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6.3k
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How To Determine The Promoter Region When Look For Over-Represented Transcription Factor Binding Sites?
transcription-factor
updated 7.7 years ago by 20 • written 11.8 years ago by ▴ 370
0
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0
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2.7k
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How to filter genes in time course RNA-seq experiments with two replicates for clustering?
cluster rna-seq
updated 3.8 years ago by 45k • written 11.1 years ago by ▴ 370
0
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1
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55k
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Comment: C: List Of All Transcription Factors In Human
11.2 years ago by liux.bio ▴ 370
0
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0
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5.2k
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Comment: C: How to filter out the non-coding genes?
11.3 years ago by liux.bio ▴ 370
0
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1
reply
41k
views
Comment: C: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
11.7 years ago by liux.bio ▴ 370
0
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1
reply
4.0k
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Comment: C: How To Get Non-Overlapping Sequences Of Introns, Utrs, Flanking Regions For A Ge
11.7 years ago by liux.bio ▴ 370
0
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3
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4.0k
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How To Get Non-Overlapping Sequences Of Introns, Utrs, Flanking Regions For A Gene?
bioconductor utr
11.7 years ago by liux.bio ▴ 370
0
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2
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6.3k
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Comment: C: How To Determine The Promoter Region When Look For Over-Represented Transcriptio
11.8 years ago by liux.bio ▴ 370
0
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0
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5.4k
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Comment: C: How To Combine Cytoscape App “Bingo” With David?
11.8 years ago by liux.bio ▴ 370
0
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2
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5.4k
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How To Combine Cytoscape App “Bingo” With David?
cytoscape
updated 11.8 years ago by ▴ 890 • written 11.8 years ago by ▴ 370
0
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0
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32k
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Comment: C: Determine Transcription Factors For Genes
11.8 years ago by liux.bio ▴ 370
0
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0
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41k
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Comment: C: How To Get The Subclusters From The Object Of Hclust() Using Cutree() According
11.9 years ago by liux.bio ▴ 370
0
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0
replies
41k
views
Comment: C: How To Get The Subclusters From The Object Of Hclust() Using Cutree() According
11.9 years ago by liux.bio ▴ 370
0
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0
replies
12k
views
Comment: C: How To Use Clusgap() When The Cluster Method Is Hierarchical Clustering?
11.9 years ago by liux.bio ▴ 370
0
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1
reply
12k
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Comment: C: How To Use Clusgap() When The Cluster Method Is Hierarchical Clustering?
11.9 years ago by liux.bio ▴ 370
1
vote
5
replies
12k
views
How To Use Clusgap() When The Cluster Method Is Hierarchical Clustering?
r clustering
updated 11.9 years ago by 56k • written 11.9 years ago by ▴ 370
0
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0
replies
4.0k
views
Comment: C: How To Get Tissue-Specific Protein-Protein Interactions?
12.0 years ago by liux.bio ▴ 370
2
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2
replies
4.0k
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How To Get Tissue-Specific Protein-Protein Interactions?
12.0 years ago by liux.bio ▴ 370
0
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0
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5.8k
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Comment: C: Identify Differentially Expressed Genes With Two Groups In Which There Are Only
12.2 years ago by liux.bio ▴ 370
0
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0
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5.8k
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Comment: C: Identify Differentially Expressed Genes With Two Groups In Which There Are Only
12.2 years ago by liux.bio ▴ 370
8
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9
replies
5.8k
views
Identify Differentially Expressed Genes With Two Groups In Which There Are Only Two Replicates
microarray differential-expression
updated 12.2 years ago by 5.2k • written 12.2 years ago by ▴ 370
0
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0
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5.8k
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Comment: C: Identify Differentially Expressed Genes With Two Groups In Which There Are Only
12.2 years ago by liux.bio ▴ 370
0
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1
reply
5.8k
views
Comment: C: Identify Differentially Expressed Genes With Two Groups In Which There Are Only
12.2 years ago by liux.bio ▴ 370
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