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Answer: A: Merge txt files in R into single Excel
7.1 years ago by ivivek_ngs ★ 5.2k
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2.7k
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Answer: C: CNV / SV Filtration
7.1 years ago by ivivek_ngs ★ 5.2k
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1.8k
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Answer: A: How to exclude noisy CNV from study?
7.1 years ago by ivivek_ngs ★ 5.2k
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0
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2.3k
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Answer: A: How to read multiple samples with DESeq2?
7.1 years ago by ivivek_ngs ★ 5.2k
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3.2k
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Answer: A: compare peaks in a gene list (coordinates)
7.1 years ago by ivivek_ngs ★ 5.2k
2
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1
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3.2k
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Answer: A: How to remove adaptors if you don't know their names/sequences? (eg from public
7.1 years ago by ivivek_ngs ★ 5.2k
2
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1
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2.4k
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Answer: A: CNA clonality for non-WES/WGS data
7.4 years ago by ivivek_ngs ★ 5.2k
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3.6k
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Answer: A: How do I find an example of how to calculate FPKM with cufflinks?
7.4 years ago by ivivek_ngs ★ 5.2k
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0
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1.6k
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Answer: A: correlation of mutation of one gene and expression of second gene in same patien
7.5 years ago by ivivek_ngs ★ 5.2k
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1
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1.9k
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Answer: A: Experimental Design with DEseq2
7.5 years ago by ivivek_ngs ★ 5.2k
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2.3k
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Answer: A: Mutation data from ICGC
7.5 years ago by ivivek_ngs ★ 5.2k
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1.7k
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Answer: A: Update on the best pipeline for sequencing?
7.5 years ago by ivivek_ngs ★ 5.2k
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1.5k
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Answer: A: Gene set analyses using GSREG in R and interpretation
7.5 years ago by ivivek_ngs ★ 5.2k
4
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2
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12k
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Answer: A: pca analysis for differential gene expression data of microarray samples of simi
7.5 years ago by ivivek_ngs ★ 5.2k
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1
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1.9k
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Answer: A: UCSC peak calling - weird results
7.5 years ago by ivivek_ngs ★ 5.2k
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5.4k
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Answer: A: Can I use AME - Analysis of Motif Enrichment - for RNA-Seq data?
7.6 years ago by ivivek_ngs ★ 5.2k
4
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1
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12k
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Answer: A: PCA tpm fpkm
7.7 years ago by ivivek_ngs ★ 5.2k
2
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1
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1.8k
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Answer: A: Downstream cancer variant reporting
updated 7.7 years ago by 19k • written 7.9 years ago by ★ 5.2k
1
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0
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3.3k
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Answer: A: snp, indels and their densities in each chromosome
7.8 years ago by ivivek_ngs ★ 5.2k
1
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0
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4.6k
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Answer: A: IPA Core analysis
7.8 years ago by ivivek_ngs ★ 5.2k
1
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0
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3.2k
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Answer: A: Any tools available to generate fake raw reads from assembled genomes?
7.8 years ago by ivivek_ngs ★ 5.2k
0
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1
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2.1k
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Answer: A: GSEA for organisms with no GO terms?
7.8 years ago by ivivek_ngs ★ 5.2k
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1.4k
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Answer: C: Working with sensitive personal data in bioinformatics
7.8 years ago by ivivek_ngs ★ 5.2k
2
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10k
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Answer: A: deseq2 user defined size factors
7.8 years ago by ivivek_ngs ★ 5.2k
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0
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1.3k
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Answer: A: Are mapped reads between 2 regions common?
7.8 years ago by ivivek_ngs ★ 5.2k
1
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1
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5.6k
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Answer: A: Extract read counts from fastq files
7.9 years ago by ivivek_ngs ★ 5.2k
0
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0
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1.8k
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Answer: A: How to find the distance from one variant to 5' UTR and 3' UTR
7.9 years ago by ivivek_ngs ★ 5.2k
6
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2
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5.6k
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Answer: A: Data integration between gene expression - RNAseq and DNA methylation - Illumina
7.9 years ago by ivivek_ngs ★ 5.2k
1
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0
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8.4k
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Answer: A: Convert HTSeq output ENSG ID to HGNC Gene Symbol and preserve counts
7.9 years ago by ivivek_ngs ★ 5.2k
1
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2
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1.4k
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Answer: A: Related to species classification information retrivel
7.9 years ago by ivivek_ngs ★ 5.2k
4
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0
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6.3k
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Answer: A: Combining RNA seq and H3K27ac ChIP seq data
7.9 years ago by ivivek_ngs ★ 5.2k
0
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1
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16k
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Answer: A: How to download list of compounds from pubchem database using command line
7.9 years ago by ivivek_ngs ★ 5.2k
0
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1
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2.9k
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Answer: A: concatenate using cat
7.9 years ago by ivivek_ngs ★ 5.2k
5
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0
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6.0k
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Answer: A: Beginner in Bioinformatics / computational biology field
7.9 years ago by ivivek_ngs ★ 5.2k
0
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1
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2.7k
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Answer: A: Visualizing mutations burden vs. gene expression
7.9 years ago by ivivek_ngs ★ 5.2k
2
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1
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6.8k
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Answer: A: creating sub-network from a gene list in cytoscape
7.9 years ago by ivivek_ngs ★ 5.2k
2
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1
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1.6k
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Answer: A: Field search in BED
7.9 years ago by ivivek_ngs ★ 5.2k
0
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0
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1.9k
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Answer: A: Variant detection - reference-free - kmer - RUFUS
7.9 years ago by ivivek_ngs ★ 5.2k
0
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0
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3.2k
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Answer: A: What training do you think a computer scientist should do to move into the bioin
7.9 years ago by ivivek_ngs ★ 5.2k
0
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1
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3.2k
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Answer: A: What the Color is in heatmap for time series analysis
7.9 years ago by ivivek_ngs ★ 5.2k
0
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0
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3.1k
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Answer: A: What is best commercial software for exome/genome interpretation?
7.9 years ago by ivivek_ngs ★ 5.2k
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0
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3.1k
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Answer: A: Cancer CNV workflow
7.9 years ago by ivivek_ngs ★ 5.2k
1
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0
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3.3k
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Answer: A: Phylogenetic tree based on CNV data
7.9 years ago by ivivek_ngs ★ 5.2k
0
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1
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1.3k
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Answer: A: microarray data analysis
7.9 years ago by ivivek_ngs ★ 5.2k
1
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1
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5.6k
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Answer: A: Compare replicates to check their correlation
7.9 years ago by ivivek_ngs ★ 5.2k
0
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0
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2.4k
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Answer: A: How to separate chip-seq peaks which are enriched for known TFs motifs from give
7.9 years ago by ivivek_ngs ★ 5.2k
0
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0
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2.3k
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Answer: A: filtering the rows in R
7.9 years ago by ivivek_ngs ★ 5.2k
4
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0
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4.1k
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Answer: A: Do I have to check every fastqc to make good quality?
7.9 years ago by ivivek_ngs ★ 5.2k
2
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0
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6.4k
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Answer: A: Does anyone use Python for variant calling?
7.9 years ago by ivivek_ngs ★ 5.2k
2
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0
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3.3k
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Answer: A: RNA-seq SNP analysis
7.9 years ago by ivivek_ngs ★ 5.2k
175 results • Page 2 of 4
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