User: lsp03yjh
lsp03yjh • 520
- Reputation:
- 520
- Status:
- Trusted
- Location:
- China
- Website:
- http://starbase.sysu.e...
- Scholar ID:
- Google Scholar Page
- Last seen:
- 14 hours ago
- Joined:
- 4 years, 5 months ago
- Email:
- l*******@gmail.com
about me
Posts by lsp03yjh
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... **RNA-binding proteins (RBPs)** regulate the expression of thousands of transcripts, and some are reported to be involved in human tumorigenesis.
We conducted comprehensive analyses for expression, somatic copy number alteration (SCNA), and mutation profiles of **1,542 RBPs in ∼7,000 clinical spec ...
written 3 months ago by
lsp03yjh • 520
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... You can use **[starBase][1]** to discover lncRNA-miRNA and lncRNA-RBP interactions.
[1]: http://starbase.sysu.edu.cn/ ...
written 8 months ago by
lsp03yjh • 520
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... We have developed **[RMBase v2.0][1]** to decode the map of RNA modifications (>100 different modification types) , as well as their relationships with microRNA binding events, disease-related SNPs or variations and RNA-binding proteins (RBP).
RMBase v2.0 was expanded with **~1402760 modificati ...
written 8 months ago by
lsp03yjh • 520
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... **The spatial and temporal transcriptional landscape** of long non-coding RNAs (lncRNAs,) during human brain development remains poorly understood.
Here, we developed a method for the genome-wide lncRNA transcriptional analysis in an extensive series of **1340 post-mortem human brain specimens col ...
written 9 months ago by
lsp03yjh • 520
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... RMBase v2.0 has been developed, RMBase v2.0 is freely available at [http://rna.sysu.edu.cn/rmbase/][1]
[1]: http://rna.sysu.edu.cn/rmbase/index.php ...
written 9 months ago by
lsp03yjh • 520
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Answer:
A: miRNA Target database?
... You can try the [**starBase**][1] (http://starbase.sysu.edu.cn/) database, it has been updated to decode **miRNA-mRNA, miRNA-lncRNA,** miRNA-sncRNA, miRNA-circRNA, miRNA-pseudogene, protein-lncRNA inteactions from **CLIP-Seq (HITS-CLIP, PAR-CLIP, iCLIP, CLASH) and degradome sequencing data**.
starB ...
written 14 months ago by
lsp03yjh • 520
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... You can downloaded **all expression values of lncRNAs** and protein-coding genes generated by TCGA RNA-seq datasets from **[oncoNcRNA download][1]** page.
[1]: http://rna.sysu.edu.cn/onconcrna/download.php ...
written 14 months ago by
lsp03yjh • 520
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... We had released **[oncoNcRNA][1]**, a web portal for explore the ncRNAs (lncRNAs, miRNAs, piRNAs, snoRNAs, tRNAs) with oncogenic potentials in **64 human cancer types(>20000 tumor samples and >800 cancer cell lines)**. It is a valuable tool for investigating the function and clinical relevance ...
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... Thank you. We are testing network, some regions can visit it, as you said that it might be firewall issues. ...
written 16 months ago by
lsp03yjh • 520
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... Thanks your information. I test our website, it is ok, you can visit it again. ...
written 16 months ago by
lsp03yjh • 520
Latest awards to lsp03yjh
Appreciated
15 days ago,
created a post with more than 5 votes.
For Transcription Factor Binding Sites, Motifs and Profiles from ~10200 ChIP-seq and TCGA Pan-Cancer data
Popular Question
6 weeks ago,
created a question with more than 1,000 views.
For deepBase: Identification, Expression, Evolution and Function of lncRNAs, circRNAs, sRNAs from deep-sequencing data
Popular Question
8 weeks ago,
created a question with more than 1,000 views.
For deepBase: Identification, Expression, Evolution and Function of lncRNAs, circRNAs, sRNAs from deep-sequencing data
Epic Question
6 months ago,
created a question with more than 10,000 views.
For Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Binding Proteins From TCGA 14 Cancer Types and CLIP-seq data
Popular Question
6 months ago,
created a question with more than 1,000 views.
For deepBase: Identification, Expression, Evolution and Function of lncRNAs, circRNAs, sRNAs from deep-sequencing data
Appreciated
10 months ago,
created a post with more than 5 votes.
For Discovering protein-lncRNA interactions from large-scale CLIP-Seq and TCGA Cancer datasets
Popular Question
15 months ago,
created a question with more than 1,000 views.
For StarScan: scanning small RNA targets in lncRNA, circRNA, mRNA and pseudo genes from degradome sequencing data
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16 months ago,
created a post with more than 5 votes.
For Discovering protein-lncRNA interactions from large-scale CLIP-Seq and TCGA Cancer datasets
Popular Question
20 months ago,
created a question with more than 1,000 views.
For StarScan: scanning small RNA targets in lncRNA, circRNA, mRNA and pseudo genes from degradome sequencing data
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20 months ago,
created a post with more than 5 votes.
For Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, CeRNAs And RNA-Binding Proteins From TCGA 14 Cancer Types
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21 months ago,
created a question with more than 1,000 views.
For StarScan: scanning small RNA targets in lncRNA, circRNA, mRNA and pseudo genes from degradome sequencing data
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22 months ago,
created an answer with at least 3 up-votes.
For A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
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For StarScan: scanning small RNA targets in lncRNA, circRNA, mRNA and pseudo genes from degradome sequencing data
Scholar
2.4 years ago,
created an answer that has been accepted.
For A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
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created an answer with at least 3 up-votes.
For A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
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2.8 years ago,
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For Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Proteins(Rbps) From 14 Cancer Types
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created a question with more than 1,000 views.
For Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Proteins(Rbps) From 14 Cancer Types
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4.2 years ago,
created a post with more than 5 votes.
For Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Proteins(Rbps) From 14 Cancer Types
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