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0
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replies
879
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Comment:
Comment: retroSeeker: discovering a large set of retrotransposons in humans and any speci
11 months ago by
lsp03yjh
▴ 860
1
vote
3
replies
879
views
Tool:
retroSeeker: discovering a large set of retrotransposons in humans and any species
Mobile-element
Evolution
Retrotransposon
11 months ago by
lsp03yjh
▴ 860
1
vote
1
reply
879
views
Answer:
Answer: retroSeeker: discovering a large set of retrotransposons in humans and any speci
11 months ago by
lsp03yjh
▴ 860
1
vote
1
reply
639
views
Tool:
trackBrowser: Visualization of sequencing data within a given genome region
RNA
browser
modification
updated 2.1 years ago by
Alex Reynolds
36k • written 2.1 years ago by
lsp03yjh
▴ 860
3
votes
1
reply
971
views
Tool:
The Encyclopedia of RNA Epitranscriptome : decoding the mechanisms and functions of diverse RNA modifications
m6A
m1A
m5C
modification
epitranscriptome
2.1 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
971
views
Answer:
Answer: The Encyclopedia of RNA Epitranscriptome : decoding the mechanisms and functions
2.1 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
643
views
Answer:
Answer: CLIP and CLASH data for miRNA-RNA interaction
2.4 years ago by
lsp03yjh
▴ 860
4
votes
0
replies
19k
views
Answer:
Answer: Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Bi
updated 2.9 years ago by
Ram
44k • written 10.8 years ago by
lsp03yjh
▴ 860
1
vote
0
replies
19k
views
Answer:
Answer: Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Bi
updated 2.2 years ago by
Ram
44k • written 9.0 years ago by
lsp03yjh
▴ 860
0
votes
1
reply
6.5k
views
Comment:
C: RMBase: The Landscape of RNA Modifications
updated 5.0 years ago by
Ram
44k • written 9.1 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
2.5k
views
Answer:
Answer: RNA base modification
updated 2.7 years ago by
Ram
44k • written 9.1 years ago by
lsp03yjh
▴ 860
8
votes
10
replies
7.6k
views
7 follow
Tool:
Transcription Factor Binding Sites, Motifs and Expression Profiles from ~10200 ChIP-seq and ~20000 RNA-seq samples
ChIP-Seq
transcription-factor
miRNA
lncRNA
updated 20 months ago by
Ram
44k • written 8.2 years ago by
lsp03yjh
▴ 860
7
votes
4
replies
4.8k
views
Tool:
RNA Motifs and CLIP-seq database from PAR-CLIP, iCLIP, eCLIP, dCLIP, CLASH, CLEAR-CLIP, irCLIP,sCLIP, hiCLIP and uvCLIP
iCLIP
PAR-CLIP
HITS-CLIP
eCLIP
updated 18 months ago by
Ram
44k • written 6.2 years ago by
lsp03yjh
▴ 860
11
votes
7
replies
6.5k
views
Tool:
RNA Modification Database and Epitranscriptome Sequencing Data
Epitranscriptome
m5C
m6A
RNA-modification
m1A
updated 2.3 years ago by
Ram
44k • written 9.2 years ago by
lsp03yjh
▴ 860
4
votes
3
replies
2.0k
views
Tool:
Deciphering LncRNA-Target, NcRNA-Target, Pseudogene-Target and mRNA-Target Interactions from RNA Interactome Sequencing Data
lncRNA
interactome
miRNA
RNA-Interactome
updated 17 months ago by
Ram
44k • written 6.0 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
4.8k
views
Comment:
C: RNA Motifs and CLIP-seq database from PAR-CLIP, HITS-CLIP, iCLIP, eCLIP, dCLIP,
6.0 years ago by
lsp03yjh
▴ 860
0
votes
1
reply
2.0k
views
Comment:
C: Deciphering LncRNA-Target, NcRNA-Target, Pseudogene-Target and mRNA-Target Inter
6.0 years ago by
lsp03yjh
▴ 860
6
votes
0
replies
4.3k
views
Tool:
Discovering protein-lncRNA interactions from large-scale CLIP-Seq and TCGA Cancer datasets
cancer
CLIP-Seq
RBP
lncRNA
RNA-Seq
updated 2.7 years ago by
Ram
44k • written 9.9 years ago by
lsp03yjh
▴ 860
1
vote
0
replies
3.6k
views
Answer:
A: non-coding RNAs target predictions
6.0 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
4.8k
views
Answer:
A: Target gene of LncRNA
6.0 years ago by
lsp03yjh
▴ 860
1
vote
0
replies
6.0k
views
Answer:
A: Predict An Rna'S Binding Partners
6.0 years ago by
lsp03yjh
▴ 860
2
votes
0
replies
2.9k
views
Answer:
A: lncRNA-mRNA binding prediction database?
6.0 years ago by
lsp03yjh
▴ 860
1
vote
0
replies
3.4k
views
Comment:
C: Finding gene expression from TCGA pan cancer
6.1 years ago by
lsp03yjh
▴ 860
1
vote
0
replies
3.4k
views
Answer:
A: Finding gene expression from TCGA pan cancer
6.1 years ago by
lsp03yjh
▴ 860
10
votes
0
replies
2.2k
views
News:
Pan-Cancer Analysis of RNA Binding Proteins in ~7000 tumor samples
Pan-Cancer
mutations
TCGA
RNA-seq
cancer-driver
updated 19 months ago by
Ram
44k • written 6.9 years ago by
lsp03yjh
▴ 860
22
votes
22
replies
19k
views
Tool:
Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Binding Proteins From TCGA 32 Cancer Types and CLIP-seq data
cancer
TCGA
RNA-Binding-Proteins
miRNA
lncRNA
updated 2.2 years ago by
Ram
44k • written 10.8 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
4.8k
views
Comment:
C: CLIP-seq database contains PAR-CLIP, HITS-CLIP, iCLIP, eCLIP, dCLIP, CLASH, CLEA
6.2 years ago by
lsp03yjh
▴ 860
5
votes
7
replies
3.8k
views
Tool:
CircTools: Softwares for Discovering circRNA-microRNA Interactions from CLIP-Seq Datasets
circRNA
CLIP-seq
microRNA
RNA-seq
Interactome
updated 17 months ago by
Ram
44k • written 6.6 years ago by
lsp03yjh
▴ 860
3
votes
0
replies
2.5k
views
Tool:
Decode the Map of RNA Modifications from Epitranscriptome Sequencing Data
m5C
m1A
pseudouridine
SNP
m6A
updated 17 months ago by
Ram
44k • written 7.3 years ago by
lsp03yjh
▴ 860
2
votes
1
reply
3.9k
views
Tool:
oncoNcRNA: Exploring the lncRNAs and miRNAs with Oncogenic Potentials from TCGA and CCLE cancer samples
tcga
ccle
miRNA
cancer
lncRNA
updated 17 months ago by
Ram
44k • written 7.8 years ago by
lsp03yjh
▴ 860
0
votes
1
reply
2.5k
views
Answer:
A: How to find target genes of long non coding RNA
7.3 years ago by
lsp03yjh
▴ 860
0
votes
1
reply
1.9k
views
News:
Spatio-temporal Transcriptome of LncRNAs in Human Brain
Parkinson
lncRNA
Alzheimer
brain
transcriptome
updated 19 months ago by
Ram
44k • written 7.4 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
6.5k
views
Answer:
A: RNA Modification Database and The Landscape of RNA Modifications
7.4 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
3.3k
views
Answer:
A: miRNA Target database?
7.8 years ago by
lsp03yjh
▴ 860
1
vote
1
reply
2.9k
views
Answer:
A: Where can i download the lncRNA expression profile for Lung adenocarcinoma
7.8 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
19k
views
Comment:
Comment: Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Bi
updated 2.2 years ago by
Ram
44k • written 9.2 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
7.6k
views
Comment:
C: Transcription Factor Binding Sites, Motifs, Profiles and Targets from ~10200 ChI
8.0 years ago by
lsp03yjh
▴ 860
0
votes
1
reply
7.6k
views
Comment:
C: Transcription Factor Binding Sites, Motifs, Profiles and Targets from ~10200 ChI
8.0 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
19k
views
Answer:
A: Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Bi
8.1 years ago by
lsp03yjh
▴ 860
1
vote
0
replies
4.0k
views
Answer:
A: Transcription Factor Dna-Binding Sites
8.2 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
6.5k
views
Answer:
A: RNA Modification Database and The Landscape of RNA Modifications
8.2 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
6.5k
views
Comment:
C: RMBase: The Landscape of RNA Modifications from RNA-Seq data
8.4 years ago by
lsp03yjh
▴ 860
1
vote
4
replies
2.6k
views
Tool:
Human snoRNA atlas from small RNA sequencing data in deepBase
snoRNA
small-RNA-sequencing
expression
cancer
updated 17 months ago by
Ram
44k • written 8.9 years ago by
lsp03yjh
▴ 860
1
vote
0
replies
1.8k
views
Answer:
A: Retrieve RNA-protein binding sites from CLIP-Seq
8.8 years ago by
lsp03yjh
▴ 860
2
votes
0
replies
2.6k
views
Tool:
deepBase: Identification, Expression, Evolution and Function of lncRNAs, circRNAs, sRNAs from deep-sequencing data
circRNA
miRNA
expression
lncRNA
RNA-Seq
updated 17 months ago by
Ram
44k • written 9.1 years ago by
lsp03yjh
▴ 860
2
votes
1
reply
2.1k
views
Answer:
Answer: What tools can use to find RNA modification sites?
updated 2.2 years ago by
Ram
44k • written 9.2 years ago by
lsp03yjh
▴ 860
1
vote
1
reply
4.8k
views
Answer:
Answer: StarScan: scanning small RNA targets in lncRNA, circRNA, mRNA and pseudo genes f
updated 2.3 years ago by
Ram
44k • written 9.2 years ago by
lsp03yjh
▴ 860
2
votes
2
replies
4.8k
views
Tool:
StarScan: scanning small RNA targets in lncRNA, circRNA, mRNA and pseudo genes from degradome sequencing data
circRNA
RNA-Seq
miRNA
lncrna
degradome-sequencing
updated 2.3 years ago by
Ram
44k • written 9.6 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
19k
views
Comment:
C: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
10.6 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
19k
views
Comment:
A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
10.6 years ago by
lsp03yjh
▴ 860
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