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Comment: C: Forcing A1/A2 alleles in PLINK in a VCF phased file
8.0 years ago by chrchang523 11k
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10k
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Comment: C: Forcing A1/A2 alleles in PLINK in a VCF phased file
8.0 years ago by chrchang523 11k
4
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10k
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Answer: A: Forcing A1/A2 alleles in PLINK in a VCF phased file
8.0 years ago by chrchang523 11k
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3.2k
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Comment: C: illumina genotype reports _lgen to ped using plink
8.0 years ago by chrchang523 11k
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3.2k
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Answer: A: illumina genotype reports _lgen to ped using plink
8.0 years ago by chrchang523 11k
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5.9k
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Comment: C: what is 0 in the plink .bim file under allele1/2 column?
8.1 years ago by chrchang523 11k
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5.9k
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Answer: A: what is 0 in the plink .bim file under allele1/2 column?
8.1 years ago by chrchang523 11k
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11k
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Comment: C: ld matrix in plink
8.1 years ago by chrchang523 11k
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11k
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Answer: A: ld matrix in plink
8.1 years ago by chrchang523 11k
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7.6k
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Answer: A: How does PLINK --recode12 code SNPs from ACTG to 1 and 2 in .ped files?
8.1 years ago by chrchang523 11k
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2.9k
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Answer: A: GT field in VCF only has one number?
8.1 years ago by chrchang523 11k
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5.8k
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Answer: A: Output the call rate of genotypes in plink
8.1 years ago by chrchang523 11k
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25k
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Comment: C: Plink: Quick Way To Combine Two Datasets Using Only Common Markers
8.2 years ago by chrchang523 11k
5
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2.7k
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Answer: A: merge cases and controls with plink
8.3 years ago by chrchang523 11k
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2.4k
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Answer: A: Convert and filter VCF by a pre-existing BIM
8.3 years ago by chrchang523 11k
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6.8k
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Comment: C: Merging files in plink
8.3 years ago by chrchang523 11k
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16k
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Answer: A: PCA using plink files
8.3 years ago by chrchang523 11k
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3.7k
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Answer: A: Plink --het function and sample size
8.4 years ago by chrchang523 11k
2
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3.4k
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Answer: A: case control association analysis with covariates in plink?
8.4 years ago by chrchang523 11k
2
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11k
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Comment: C: how to switch REF and ALT alleles in VCF files if the REF is incorrect according
8.4 years ago by chrchang523 11k
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Answer: A: how to switch REF and ALT alleles in VCF files if the REF is incorrect according
8.4 years ago by chrchang523 11k
3
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7.5k
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Answer: A: Get LD data for any two SNPs
8.4 years ago by chrchang523 11k
1
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1
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5.2k
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Comment: C: plink vcf recodeA error ALT allele duplicates REF allele
8.4 years ago by chrchang523 11k
1
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1
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5.2k
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Answer: A: plink vcf recodeA error ALT allele duplicates REF allele
8.4 years ago by chrchang523 11k
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5.6k
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Answer: A: Obtain alleles A1 and A2 alleles from plink output
8.5 years ago by chrchang523 11k
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1
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4.7k
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Comment: C: Inconsistency in VCF and Plink format after conversion
8.5 years ago by chrchang523 11k
2
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1
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4.7k
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Comment: C: Inconsistency in VCF and Plink format after conversion
8.5 years ago by chrchang523 11k
1
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1
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4.1k
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Comment: C: use of 2 covariate files for association analysis in plink
8.5 years ago by chrchang523 11k
3
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1
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4.1k
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Answer: A: use of 2 covariate files for association analysis in plink
8.5 years ago by chrchang523 11k
1
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1
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3.2k
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Comment: C: computational tools for univariate and multivariate GWAS using quantitative trai
8.5 years ago by chrchang523 11k
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0
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2.5k
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Comment: C: Genotype normalization: the PLINK --standard-beta flag
8.5 years ago by chrchang523 11k
2
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1
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2.6k
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Answer: A: Creating Binary file (*.bed, *.bim, *.fam file) from 1000GP legend file
8.6 years ago by chrchang523 11k
2
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0
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1.8k
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Answer: A: Cutting up plink .ped/fam files to create files for n genomic windows
8.6 years ago by chrchang523 11k
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0
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3.9k
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Answer: A: Require help in using PLINK flags and scripts
8.6 years ago by chrchang523 11k
2
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0
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3.5k
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Answer: A: Is there a way to tell PLINK and VCFtools to sort the samples in a particular or
8.7 years ago by chrchang523 11k
0
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0
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1.8k
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Comment: C: PLINK- chromosome ID disappears after running association tests
8.7 years ago by chrchang523 11k
2
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5.7k
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Comment: C: Delete Chromosome With Plink
8.7 years ago by chrchang523 11k
2
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0
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2.5k
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Answer: A: LD-pruning before logistic regression?
8.7 years ago by chrchang523 11k
2
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0
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9.7k
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Answer: A: Fewer tokens than expected error in Plink when using --filter
8.8 years ago by chrchang523 11k
2
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1
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2.6k
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Answer: A: plink and mitochondrial DNA
8.9 years ago by chrchang523 11k
2
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1
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3.8k
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Answer: A: PLINK linear association
8.9 years ago by chrchang523 11k
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0
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2.7k
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Answer: A: Use Plink to calculate OR for homozygous ?
8.9 years ago by chrchang523 11k
0
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0
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1.9k
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Comment: C: How to make plink treat SNP (counts of minor alleles) as categorical
8.9 years ago by chrchang523 11k
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0
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4.8k
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Comment: C: Weird GENO file (geno/ind/snp)
9.0 years ago by chrchang523 11k
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1
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4.8k
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Answer: A: Weird GENO file (geno/ind/snp)
9.0 years ago by chrchang523 11k
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3.0k
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Comment: C: PLINK --within flag not clustering all of the samples
9.0 years ago by chrchang523 11k
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1
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3.0k
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Comment: C: PLINK --within flag not clustering all of the samples
9.0 years ago by chrchang523 11k
0
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1
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3.0k
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Comment: C: PLINK --within flag not clustering all of the samples
9.0 years ago by chrchang523 11k
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1
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1.8k
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Comment: C: PLINK error: "Could not place marker for left window edge"
9.0 years ago by chrchang523 11k
2
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0
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2.6k
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Answer: A: How to write a program to support Plink Binary data format
9.0 years ago by chrchang523 11k
914 results • Page 15 of 19
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