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Comment: Comment: No genes mapped in clusterprofiler gseGO
4 months ago by jv ★ 1.8k
0
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1
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761
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Comment: Comment: No genes mapped in clusterprofiler gseGO
4 months ago by jv ★ 1.8k
0
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0
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3.9k
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Comment: Comment: No gene can be mapped
4 months ago by jv ★ 1.8k
0
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1
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338
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Comment: Comment: Ribo-Seq Samtools pileup
4 months ago by jv ★ 1.8k
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0
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1.4k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
4 months ago by jv ★ 1.8k
0
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1
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1.4k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
4 months ago by jv ★ 1.8k
0
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0
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353
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Comment: Comment: Database for immunological pathways
4 months ago by jv ★ 1.8k
1
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1
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1.1k
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Comment: Comment: Finding differentially expressed genes between Seurat clusters
4 months ago by jv ★ 1.8k
0
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1
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1.4k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
4 months ago by jv ★ 1.8k
2
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0
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966
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Comment: Comment: How to remove center population from seurat cluster
4 months ago by jv ★ 1.8k
1
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0
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638
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Comment: Comment: ORA with clusterProfiler
4 months ago by jv ★ 1.8k
1
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1
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664
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Comment: Comment: Overlapping and merging ChIP-seq peaks
4 months ago by jv ★ 1.8k
0
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1
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1.1k
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Comment: Comment: Finding differentially expressed genes between Seurat clusters
5 months ago by jv ★ 1.8k
0
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1
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1.4k
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Comment: Comment: i ues schicexplorer's hicbuildmatrix code complains that two sam files do not ha
5 months ago by jv ★ 1.8k
1
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0
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483
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Comment: Comment: KEGG DATABASE
5 months ago by jv ★ 1.8k
0
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0
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332
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Comment: Comment: Contrasts in R
5 months ago by jv ★ 1.8k
0
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0
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857
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Comment: Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
5 months ago by jv ★ 1.8k
1
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0
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498
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Comment: Comment: R ComplexHeatmap - Dividing Column Annotation into Distinct Y-Axis Scales
5 months ago by jv ★ 1.8k
0
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1
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498
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Comment: Comment: R ComplexHeatmap - Dividing Column Annotation into Distinct Y-Axis Scales
5 months ago by jv ★ 1.8k
0
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1
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1.1k
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Comment: Comment: Data preparation for a ML model
5 months ago by jv ★ 1.8k
0
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2
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1.1k
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Comment: Comment: Data preparation for a ML model
5 months ago by jv ★ 1.8k
1
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1
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1.1k
views
Comment: Comment: Data preparation for a ML model
5 months ago by jv ★ 1.8k
0
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0
replies
644
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Comment: Comment: Selecting a subset of MSigDB database for GSEA
5 months ago by jv ★ 1.8k
0
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1
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995
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Comment: Comment: scRNA-seq quality control
5 months ago by jv ★ 1.8k
0
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0
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547
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Comment: Comment: WGCNA
6 months ago by jv ★ 1.8k
0
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0
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1.8k
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Comment: Comment: Running AUCell on integrated scRNAseq data
6 months ago by jv ★ 1.8k
0
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0
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546
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Comment: Comment: flowCore biexponential transformation
6 months ago by jv ★ 1.8k
0
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0
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1.5k
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Comment: Comment: How to use R installed by conda instead of it installed by apt on Ubuntu
11 months ago by jv ★ 1.8k
0
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0
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457
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Comment: Comment: Seurat: How to get all genes name of a cell ?
11 months ago by jv ★ 1.8k
0
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0
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711
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Comment: Comment: Biological replicates in RNA-seq
11 months ago by jv ★ 1.8k
1
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1
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565
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Comment: Comment: highlight regions in a dot-plot?
11 months ago by jv ★ 1.8k
0
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0
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474
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Comment: Comment: How to find marker genes for whole tissue from several different sub-tissue scRN
11 months ago by jv ★ 1.8k
0
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0
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535
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Comment: Comment: Co-Expression of All Genes with a Single Gene (Spatial Transcriptomics)
11 months ago by jv ★ 1.8k
0
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0
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1.1k
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Comment: Comment: Cibersort phenotpe file to create signature matrix
11 months ago by jv ★ 1.8k
1
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0
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477
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Comment: Comment: DESeq2 with multiple factors
11 months ago by jv ★ 1.8k
0
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0
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2.7k
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Comment: Comment: Removing specific cluster based on one gene down regulation
11 months ago by jv ★ 1.8k
0
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0
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2.4k
views
Comment: Comment: active.ident slot present but not recognized in seurat object
12 months ago by jv ★ 1.8k
0
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0
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2.4k
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Comment: Comment: active.ident slot present but not recognized in seurat object
12 months ago by jv ★ 1.8k
0
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1
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725
views
Comment: Comment: Batch effects and what to do about them
12 months ago by jv ★ 1.8k
0
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1
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2.5k
views
Comment: Comment: Adding 'gene_name' attribute to each row of GTF/GFF file (missing for CDS, trans
12 months ago by jv ★ 1.8k
0
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1
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771
views
Comment: Comment: desgin a primer for CDS
12 months ago by jv ★ 1.8k
0
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0
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3.8k
views
Comment: Comment: Need to specify "--chemistry" argument in "cellranger count"
12 months ago by jv ★ 1.8k
2
votes
2
replies
1.1k
views
Comment: Comment: rRNA contaminants RNASeq
12 months ago by jv ★ 1.8k
0
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0
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455
views
Comment: Comment: MEME - minimum of sequence for significative motif result
12 months ago by jv ★ 1.8k
1
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1
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1.2k
views
Comment: Comment: scRNA-seq: How does cell number in clusters affect the number of DE genes?
12 months ago by jv ★ 1.8k
1
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1
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1.2k
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Comment: Comment: scRNA-seq: How does cell number in clusters affect the number of DE genes?
12 months ago by jv ★ 1.8k
1
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0
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1.8k
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Comment: Comment: Problems with the input (from TPM) to run the WGCNA
12 months ago by jv ★ 1.8k
1
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1
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1.6k
views
Comment: Comment: annotation_names_side does not work in complexheatmap package
12 months ago by jv ★ 1.8k
0
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1
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1.4k
views
Comment: Comment: Same correlation values obtained at different soft threshold powers in WGCNA sig
12 months ago by jv ★ 1.8k
1
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0
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978
views
Comment: Comment: Right assay and slot for the extraction of normalized data after "sct normalizat
12 months ago by jv ★ 1.8k
297 results • Page 2 of 6
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