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Comment: Comment: Salmon ~ Effective Length
2 days ago by Rob 6.7k
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0
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1.3k
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Comment: Comment: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
17 days ago by Rob 6.7k
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454
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Answer: Answer: Salmon ~ Effective Length
19 days ago by Rob 6.7k
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1
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290
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Answer: Answer: Salmon vs Kallisto vs RSEM
19 days ago by Rob 6.7k
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1
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314
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Answer: Answer: Number of non-ATCG nucleotides replaced by Salmon
22 days ago by Rob 6.7k
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0
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481
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Comment: Comment: Details on salmon index
29 days ago by Rob 6.7k
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1
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481
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Answer: Answer: Details on salmon index
4 weeks ago by Rob 6.7k
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1
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470
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Comment: Comment: A c library for reading and writing sequences in fasta and fastq format.
3 months ago by Rob 6.7k
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566
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Comment: Comment: Mapping vs Alignment mode in Salmon
4 months ago by Rob 6.7k
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1
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566
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Answer: Answer: Mapping vs Alignment mode in Salmon
4 months ago by Rob 6.7k
6
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0
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981
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Answer: Answer: is oxford nanopore technology data paired or single end sequencing?
4 months ago by Rob 6.7k
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0
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688
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
4 months ago by Rob 6.7k
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688
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
4 months ago by Rob 6.7k
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1
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688
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Answer: Answer: Downstream analysis from STAR Alignment at transcript level
4 months ago by Rob 6.7k
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0
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599
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Comment: Comment: salmon with long reads
5 months ago by Rob 6.7k
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1
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1.7k
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Comment: Comment: How to speed Salmon index up
5 months ago by Rob 6.7k
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1
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1.7k
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Comment: Comment: How to speed Salmon index up
5 months ago by Rob 6.7k
2
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1
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599
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Answer: Answer: salmon with long read
5 months ago by Rob 6.7k
6
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1
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1.3k
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Answer: Answer: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
6 months ago by Rob 6.7k
4
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0
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694
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Answer: Answer: Fetch Fastq files directly for SRA data
8 months ago by Rob 6.7k
2
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0
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3.7k
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Comment: Comment: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
9 months ago by Rob 6.7k
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1
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1.0k
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Comment: Comment: Problem creating salmon index
10 months ago by Rob 6.7k
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0
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901
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Answer: Answer: scRNAseq: thoughts on merging datasets generating from different version of 10x
11 months ago by Rob 6.7k
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1
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2.0k
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Comment: Comment: Mapping vs Alignment
11 months ago by Rob 6.7k
5
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1
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2.0k
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Answer: Answer: Mapping vs Alignment
11 months ago by Rob 6.7k
1
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2
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2.0k
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Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
11 months ago by Rob 6.7k
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1
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812
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Answer: Answer: How does salmon uses polyester?
13 months ago by Rob 6.7k
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0
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2.9k
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Comment: Comment: g++: error：unrecognized command line option ‘-std=c++2a’
13 months ago by Rob 6.7k
2
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0
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2.4k
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Comment: Comment: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
13 months ago by Rob 6.7k
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0
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878
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Answer: Answer: How to get fraction of unspliced reads for specific gene from scRNAseq Cell Rang
14 months ago by Rob 6.7k
5
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2
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1.7k
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Answer: Answer: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
15 months ago by Rob 6.7k
2
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1
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1.5k
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Comment: Comment: salmon output interpretation
15 months ago by Rob 6.7k
2
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0
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2.6k
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Comment: Comment: long read + salmon? (transcript abundance)
15 months ago by Rob 6.7k
6
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1
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2.6k
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Answer: Answer: long read + salmon? (transcript abundance)
updated 15 months ago by 83k • written 15 months ago by 6.7k
1
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1
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952
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Answer: Answer: Salmon lib_format_counts.json - explanation
15 months ago by Rob 6.7k
1
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2
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1.1k
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Answer: Answer: Salmon TPM calculation constant
15 months ago by Rob 6.7k
4
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0
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1.4k
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Comment: Comment: KMP algorithm's time complexity
17 months ago by Rob 6.7k
0
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1
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8.3k
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Comment: Comment: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
17 months ago by Rob 6.7k
6
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0
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1.4k
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Comment: Comment: How can I check if an RNA-Seq data is stranded (strand-specific) or not?
18 months ago by Rob 6.7k
1
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1
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2.3k
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Comment: Comment: When is it advantageous to use a non-splice aware aligner like BowTie2 over a sp
18 months ago by Rob 6.7k
0
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1
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1.2k
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Comment: Comment: CellRanger v. 2.0 and v. 7.0
19 months ago by Rob 6.7k
1
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1
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1.2k
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Answer: Answer: CellRanger v. 2.0 and v. 7.0
19 months ago by Rob 6.7k
1
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0
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3.1k
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Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
19 months ago by Rob 6.7k
1
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0
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982
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Comment: Comment: High discrepancy between Primary estimate and Bootstraps from Salmon
20 months ago by Rob 6.7k
3
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1
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982
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Answer: Answer: High discrepancy between Primary estimate and Bootstraps from Salmon
20 months ago by Rob 6.7k
3
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0
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588
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Answer: Answer: Stranded or unstranded? That is the question
20 months ago by Rob 6.7k
2
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1
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947
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Answer: Answer: Salmon libtype guessing and mapping bias
21 months ago by Rob 6.7k
2
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0
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2.8k
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Answer: Answer: Can bioinformatics Phds be completely or almost completely done remotely?
21 months ago by Rob 6.7k
1
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1
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703
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Answer: Answer: Splice aware or not for RNA sequence data
22 months ago by Rob 6.7k
1
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0
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3.1k
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Comment: Comment: CellRanger runs into error when running fastq files from SRA
22 months ago by Rob 6.7k
350 results • Page 1 of 7
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