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Comment: C: How to remove non protein coding genes from single cell pre-mRNA seq?
4.0 years ago by caggtaagtat ★ 1.9k
1
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0
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659
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Answer: A: How to colour all points that agree with multiple conditions
4.0 years ago by caggtaagtat ★ 1.9k
1
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1
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3.0k
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Comment: C: Need help with STAR aligner
4.0 years ago by caggtaagtat ★ 1.9k
1
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0
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1.7k
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Answer: A: Genes vs transcripts in RNA-seq analysis
4.0 years ago by caggtaagtat ★ 1.9k
1
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1
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5.1k
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Comment: C: Running STAR with --twopassMode Basic
4.0 years ago by caggtaagtat ★ 1.9k
2
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0
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2.1k
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Answer: A: What sequence do I get when using paired-end stranded protocol
4.1 years ago by caggtaagtat ★ 1.9k
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1
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4.4k
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Comment: C: DEseq2 results differs greatly when comparing output from STAR/featureCounts and
4.1 years ago by caggtaagtat ★ 1.9k
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0
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1.2k
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Comment: C: Differential gene expression analysis
4.1 years ago by caggtaagtat ★ 1.9k
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0
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7.4k
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Comment: C: Where can I find mouse Gene MatriX file format (GMT)?
4.3 years ago by caggtaagtat ★ 1.9k
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0
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1.1k
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Comment: C: Get read counts for reads overlapping exon-intron junction from STAR-output
4.3 years ago by caggtaagtat ★ 1.9k
0
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1
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1.1k
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Comment: C: Get splice-read counts from STAR-output
4.3 years ago by caggtaagtat ★ 1.9k
1
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1
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1.1k
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Answer: A: Get splice-read counts from STAR-output
4.3 years ago by caggtaagtat ★ 1.9k
0
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0
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742
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Comment: C: Whats best practice for Gene set enrichment analysis?
4.3 years ago by caggtaagtat ★ 1.9k
1
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2
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742
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Whats best practice for Gene set enrichment analysis?
GSEA
updated 4.3 years ago by 7.6k • written 4.3 years ago by ★ 1.9k
0
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0
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2.1k
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Comment: C: Is it possible to obtain all the RefSeq transcripts of Ensembl genes for GRCh37
4.4 years ago by caggtaagtat ★ 1.9k
0
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1
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2.1k
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Answer: A: Is it possible to obtain all the RefSeq transcripts of Ensembl genes for GRCh37
4.4 years ago by caggtaagtat ★ 1.9k
2
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1
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9.0k
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Answer: A: STAR alignment EXITING because of FATAL ERROR: could not create output file
4.5 years ago by caggtaagtat ★ 1.9k
3
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0
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969
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Answer: A: Identification of Human Genes ?
4.6 years ago by caggtaagtat ★ 1.9k
1
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1
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621
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Answer: A: Cis-regulatory motif discovery from RNA-Seq
4.6 years ago by caggtaagtat ★ 1.9k
0
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0
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8.6k
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Comment: C: snakemake: pipeline failed with MissingOutputException
4.6 years ago by caggtaagtat ★ 1.9k
0
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0
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8.6k
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Comment: C: snakemake: pipeline failed with MissingOutputException
4.6 years ago by caggtaagtat ★ 1.9k
0
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2
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8.6k
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Comment: C: snakemake: pipeline failed when submit to cluster
4.6 years ago by caggtaagtat ★ 1.9k
0
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1
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8.6k
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Answer: A: snakemake: pipeline failed when submit to cluster
4.6 years ago by caggtaagtat ★ 1.9k
1
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0
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5.1k
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Comment: C: Running STAR with --twopassMode Basic
4.6 years ago by caggtaagtat ★ 1.9k
9
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2
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5.1k
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Answer: A: Running STAR with --twopassMode Basic
4.6 years ago by caggtaagtat ★ 1.9k
0
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0
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8.7k
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Comment: C: STAR mapping results
4.6 years ago by caggtaagtat ★ 1.9k
1
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1
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2.0k
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Comment: C: RNAseq differential expression analysis : no significative FDR but significative
4.7 years ago by caggtaagtat ★ 1.9k
0
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0
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8.7k
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Comment: C: STAR mapping results
4.7 years ago by caggtaagtat ★ 1.9k
2
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1
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641
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Answer: A: Making genome-wide transcription level track from transcript level count
4.7 years ago by caggtaagtat ★ 1.9k
0
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1
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8.7k
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Comment: C: STAR mapping results
4.8 years ago by caggtaagtat ★ 1.9k
1
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0
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1.0k
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Answer: A: dUTP sequencing -- different strand-ratios for different samples
4.8 years ago by caggtaagtat ★ 1.9k
0
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0
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6.7k
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Comment: C: deseq2 or edgeR
4.8 years ago by caggtaagtat ★ 1.9k
0
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1
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6.7k
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Comment: C: deseq2 or edgeR
4.8 years ago by caggtaagtat ★ 1.9k
0
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0
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6.7k
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Comment: C: deseq2 or edgeR
4.8 years ago by caggtaagtat ★ 1.9k
2
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1
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6.7k
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Comment: C: deseq2 or edgeR
4.8 years ago by caggtaagtat ★ 1.9k
4
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1
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6.7k
views
Answer: A: deseq2 or edgeR
4.8 years ago by caggtaagtat ★ 1.9k
0
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1
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6.7k
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Comment: C: deseq2 or edgeR
4.8 years ago by caggtaagtat ★ 1.9k
1
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0
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1.6k
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Comment: C: If I am in a right way in RNA-seq
4.8 years ago by caggtaagtat ★ 1.9k
0
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0
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3.3k
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Comment: C: How to create custom gtf annotation file?
4.9 years ago by caggtaagtat ★ 1.9k
1
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1
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3.3k
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Comment: A: How to create custom gtf annotation file?
4.9 years ago by caggtaagtat ★ 1.9k
3
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1
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3.3k
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Comment: C: How to create custom gtf annotation file?
4.9 years ago by caggtaagtat ★ 1.9k
1
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0
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1.4k
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Answer: A: gene prediction without GT-AG splice site bias
4.9 years ago by caggtaagtat ★ 1.9k
0
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0
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2.4k
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Comment: C: Should I generate a new Index genome in STAR for 50 base reads instead of 100 ba
4.9 years ago by caggtaagtat ★ 1.9k
0
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1
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2.4k
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Answer: A: Should I generate a new Index genome in STAR for 50 base reads instead of 100 ba
4.9 years ago by caggtaagtat ★ 1.9k
2
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2
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799
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Evolutionary distance from as many organisms as possible to humans
genome relation evolutionary distance
4.9 years ago by caggtaagtat ★ 1.9k
0
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0
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799
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Comment: C: Evolutionary distance from as many organisms as possible to humans
4.9 years ago by caggtaagtat ★ 1.9k
0
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0
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4.9k
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Comment: C: Very low percentage of assigned reads using featureCounts
4.9 years ago by caggtaagtat ★ 1.9k
0
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1
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4.9k
views
Comment: C: Very low percentage of assigned reads using featureCounts
4.9 years ago by caggtaagtat ★ 1.9k
0
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1
reply
4.9k
views
Comment: C: Very low percentage of assigned reads using featureCounts
4.9 years ago by caggtaagtat ★ 1.9k
0
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0
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2.9k
views
Answer: A: Running SortMeRNA for bulk RNAseq data
5.0 years ago by caggtaagtat ★ 1.9k
272 results • Page 2 of 6
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