Question: the bam file generated by bwa mem mode don't have SM tag?
0
gravatar for naruto1nrt
4.7 years ago by
naruto1nrt20
Australia
naruto1nrt20 wrote:

I start to use mem mode recently,but when i found it not have SM tag in bam file. is there any parameter for this?

alignment • 1.1k views
ADD COMMENTlink modified 4.7 years ago by Devon Ryan88k • written 4.7 years ago by naruto1nrt20
2
gravatar for Devon Ryan
4.7 years ago by
Devon Ryan88k
Freiburg, Germany
Devon Ryan88k wrote:

It's the -R option, for example -R "@RG\tID:Seq01p\tSM:Seq01\tPL:ILLUMINA\tPI:330".

ADD COMMENTlink written 4.7 years ago by Devon Ryan88k
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