I use GATK to do snp call. But I don't understand the BaseRecalibration report as follows . And i really don't known the word 'Observations' 'Errors' stand for.
Thanks in advance
RaedGroup R11 R11 R11
EventType M I D
EmpiricalQuality 15.0 28.0 26.0
EstimatedQReported 32 45 45
Observations 1.23e+08 1.23e+08 1.23e+08
Errors 4.35e+06 2.15E+05 4.28e+05