How to draw mapping graph?
0
0
Entering edit mode
9.7 years ago
biolab ★ 1.4k

Hi everyone,

I have mass spec peptide data. A simple example is shown below.

pep_sequence   start   end   protein_id
ACKJKAC        2       8     AT5G0030
ALLKDK         30      35    AT5G0030
AKLJHLLL       200     207   AT5G0030

I want to draw a graph with each peptide mapped onto the protein (like RNA-seq read mapping graph). Could anyone provide answers (actually I have thousands of peptides, so probably need to use R for batch running or implement R inside perl script). I will be much appreciated for your kind help! THANKS.

mapping R • 2.0k views
ADD COMMENT

Login before adding your answer.

Traffic: 2407 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6