Entering edit mode
9.7 years ago
biolab
★
1.4k
Hi everyone,
I have mass spec peptide data. A simple example is shown below.
pep_sequence start end protein_id
ACKJKAC 2 8 AT5G0030
ALLKDK 30 35 AT5G0030
AKLJHLLL 200 207 AT5G0030
I want to draw a graph with each peptide mapped onto the protein (like RNA-seq read mapping graph). Could anyone provide answers (actually I have thousands of peptides, so probably need to use R for batch running or implement R inside perl script). I will be much appreciated for your kind help! THANKS.