Question: Loss of Heterozygosity from VCF file in non-model organisms
1
gravatar for Adrian Pelin
4.6 years ago by
Adrian Pelin2.3k
Canada
Adrian Pelin2.3k wrote:

Hello,

If I have a .vcf file showing positions with variation, how can I find regions that exhibit the lowest amount of SNP density, perhaps due to LOH? In this case copy number should be irrelevant, as higher copy number usually leads to more variation.

Adrian

loh vcf • 1.2k views
ADD COMMENTlink written 4.6 years ago by Adrian Pelin2.3k
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