Entering edit mode
9.4 years ago
jlosman
•
0
Hello,
I am using pindel2vcf and the first line of the output VCF is:
##fileformat=VCFv4.0
However in the RELEASE it claims pindel2vcf was updated to support
END positions updated according to http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-version-41
I am using a downstream filter that only works with VCF file format version 4.1 and greater. Is the file format version misrepresented in the VCF or is it in fact version 4.0?
Thanks!