Using SNPSVM for variant calling
0
1
Entering edit mode
9.4 years ago
bigbang ▴ 20

Anyone could explain me how to identify SNPs using Support vector machine? I have installed SNPSVM and Libsvm. Now I just wanted to use it for a simple example like Lambda phage and need some help of generating trained models (creating true and false sites of .vcf files), how to use them in the next steps etc. I have read some papers and webpages about snpsvm but still don't really get how to execute this method exactly, because I am very new in this field and need some easy-understandable explanation. Sorry of my poor knowledge and obvious questions. Thank you.

SNP next-gen • 1.4k views
ADD COMMENT

Login before adding your answer.

Traffic: 2920 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6