Finding the Nucleotides inserted in a COSMIC entry in the CosmicCompleteExport file
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6.9 years ago
thondeboer ▴ 40

I am looking at a specific cosmic mutation that has a section called “Nucleotides inserted” when I look at the entry on the website, but when I look in the download file “CosmicCompleteExport” I don’t see a field with the inserted sequence:

Web view

http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=1317906

CosmicCompleteExport

FLT3    ENST00000241453    2982    3765    TCGA-AB-2965-03    1650451    1565238    haematopoietic_and_lymphoid_tissue    NS    haematopoietic_neoplasm    acute_myeloid_leukaemia    y    1317906    c.1717_1718ins72    p.E573_S574ins14    Insertion - In frame    het    13:28608338-28608339    -            Variant of unknown origin        377    blood-bone marrow    NS    60

Is there some other file that contains that kind of information?

Regards,

Thon

cosmic • 1.5k views