Question: Finding Domain-Domain interaction score
1
gravatar for Farhad
4.4 years ago by
Farhad10
Turkey
Farhad10 wrote:

I want to find domains of proteins and then calculate a measure using number of their interacting domains.

I can use Uniprot to retrieve domains and   'domine' ( http://domine.utdallas.edu/cgi-bin/Domine?page=start) to find interaction between domains manually.

Is there any R package, source code or online tool to do this for set of proteins?

Any approach is really appreciated.

 

 

sequence R • 1.3k views
ADD COMMENTlink modified 4.4 years ago • written 4.4 years ago by Farhad10
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