Finding Domain-Domain interaction score
0
1
Entering edit mode
6.3 years ago
Farhad ▴ 10

I want to find domains of proteins and then calculate a measure using number of their interacting domains.

I can use Uniprot to retrieve domains and   'domine' ( http://domine.utdallas.edu/cgi-bin/Domine?page=start) to find interaction between domains manually.

Is there any R package, source code or online tool to do this for set of proteins?

Any approach is really appreciated.

 

 

sequence R • 1.7k views
ADD COMMENT

Login before adding your answer.

Traffic: 1912 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6