Question: Can Trinity (de novo) be coupled to Tophat?
2
gravatar for GPR
2.9 years ago by
GPR290
Mexico
GPR290 wrote:

Hello,

I understand that Trinity data can be post-processed with Bowtie and later with RSEM.

Nature protocols 8.8 (2013): 1494-1512.

I would like to know if anybody has processed Trinity assembled fasta file with TopHat or HHSplicer?

Thanks,

GP

alignment assembly • 900 views
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