Question: Can Trinity (de novo) be coupled to Tophat?
2
gravatar for GPR
3.9 years ago by
GPR310
Mexico
GPR310 wrote:

Hello,

I understand that Trinity data can be post-processed with Bowtie and later with RSEM.

Nature protocols 8.8 (2013): 1494-1512.

I would like to know if anybody has processed Trinity assembled fasta file with TopHat or HHSplicer?

Thanks,

GP

alignment assembly • 1.2k views
ADD COMMENTlink written 3.9 years ago by GPR310
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