Question

Finding Potential Proteins/Peptides From In-Tact Mw

1

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14.1 years ago

D Jensen ▴ 10

How can I search a database for potential proteins/peptides that match a specified MW (Drosophila)

database search proteomics • 2.4k views

ADD COMMENT • link updated 6.1 years ago by Biostar 20 • written 14.1 years ago by D Jensen ▴ 10

score 2 · Answer 1 · 2011-10-07

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14.1 years ago

Neilfws 49k

Lots of ways.

TagIdent - identify proteins by mass or generate list matching given MW and/or pI
emowse - search protein sequences by digest fragment molecular weight
PROFOUND - for database search using mass-spec data
PEPFRAG - another tool for mass-spec data

ADD COMMENT • link 14.1 years ago by Neilfws 49k