Question: What Is The Best Tool To Detect Ibd In A Trio (Mom, Dad, Child)
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gravatar for Biomed
7.6 years ago by
Biomed4.5k
Bethesda, MD, USA
Biomed4.5k wrote:

I have snp data obtained from nuclear families and I want to detect "extended regions of autozygosity" using a tool. My current approach is to visualize SNPs in Genome Studio but I want to use a tool and automate this as a first pass scan before I do a manual inspection. Can tools like PLINK or Merlin be used successfully for this purpose, or do you have other suggestions?

Thanks

snp • 1.6k views
ADD COMMENTlink written 7.6 years ago by Biomed4.5k
0
gravatar for Chaim
7.5 years ago by
Chaim0
Chaim0 wrote:

You can try http://www.homozygositymapper.org/

ADD COMMENTlink written 7.5 years ago by Chaim0
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