Interpretation of hmmscan outputs
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6.8 years ago
dago ★ 2.7k

Hi performed an hmmscan of the proteins in a bacterial genomes against the PfamA db in order to identify the conserved domains.

I saved the output as in tbl format for both sequences and domains. Now, some field in the outputs are quite straightforward to understand, but there are others less clear. I was looking for a detailed description of the output, is there anything a bit more detailed than the manual?

PfamA hmmscan output protein domains • 3.1k views
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