SHAPEIT output file confusion
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Entering edit mode
6.6 years ago
j.a.yearsley ▴ 10

I have carried out SHAPEIT to phase some haplotypes. The output files from SHAPEIT are .haps and .sample. SHAPEIT mentions as HAPS/SAMPLE file (seen here: http://www.shapeit.fr/pages/m02_formats/hapssample.html )which I need in order to carry out other bioinformatic techniques.

Is there a way to create this file from the ones i already have? I have no idea how this file could be created?

 

 

shapeit haplotypes SNP • 3.5k views
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