Entering edit mode
9.4 years ago
mangfu100
▴
800
Hi.
I ran EXCAVATOR that detects copy number variations.
but, I was encountering some errors and I couldn't solve it.
Hi.
I ran EXCAVATOR that detects copy number variations.
but, I was encountering some errors and I couldn't solve it.
Hi,
It's an old post, but I found it with google. On this post, Alberto recommend to remove overlapping coordinate in bed: https://sourceforge.net/p/excavator2tool/tickets/1/
So I ran:
sort -k1,1 -k2,2n mybedfile.bed | bedtools merge > mybedfile_merged.bed
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Hi, I changed the title of your question to be more specific.
Hi,
could you found how to resolve this issue ?
I have the same problem.
Thanks