Question: How can I find somatic indel using Dindel?
gravatar for lee.jingu0626
4.6 years ago by
Korea, Republic Of
lee.jingu062630 wrote:


I have a question about somatic indel when using Dindel.

I have two files(tumor, normal bam file) and I want to find somatic indel using Dindel tool.

However, Dindel didn't provide the somatic mode for detecting the indel so I can't find somatic indel.

Is there solution to detect the somatic indel by using Dindel? Or if it is not possible, are there any other tools for somatic indel?(except VarScan, I already have the VarScan output)

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