Question: How To Convert Affymetrix Ids To Genbank Ids
1
gravatar for Anima Mundi
7.9 years ago by
Anima Mundi2.4k
Italy
Anima Mundi2.4k wrote:

Hello,

I used DAVID to retrieve GenBank IDs from Affymetrix IDs. The problem with DAVID is that is seems to have a narrow/outdated database, so a relevant part of my IDs last to be unconverted. I tried to move to BioMart's MartView, but I do not know how to use it to convert Xenopus laevis Affymetrix IDs into GenBank IDs.

I would like to solve, to summarize, two problems: a) The loss of entries. b) The use of a non typical animal model.

ADD COMMENTlink written 7.9 years ago by Anima Mundi2.4k
2
gravatar for Larry_Parnell
7.9 years ago by
Larry_Parnell16k
Boston, MA USA
Larry_Parnell16k wrote:

Have you tried the annotation file available from Affymetrix? This is likely to have information to allow you to build these links.

ADD COMMENTlink written 7.9 years ago by Larry_Parnell16k

That is exactly what I needed. I think I made a "newbye" mistake.

Thank you.

ADD REPLYlink written 7.9 years ago by Anima Mundi2.4k
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