Question: Where to find T cell epigenetics data?
0
gravatar for Zakaria Benmounah
4.4 years ago by
United Kingdom
Zakaria Benmounah50 wrote:

Hi

I'm looking for the T cells Epigenetics data, any one knows where can I find this data?

Many thanks

Zak

t cells epigenetics • 1.2k views
ADD COMMENTlink modified 3.8 years ago by Biostar ♦♦ 20 • written 4.4 years ago by Zakaria Benmounah50
2
gravatar for Saulius Lukauskas
4.4 years ago by
London, UK
Saulius Lukauskas530 wrote:

Define "Epigenetics data"? 

Roadmap Epigenomics project published a huge dump of data recently, some of it for T-Cells http://www.roadmapepigenomics.org/data/ 

Other than that there is a massive (but old) ChIP-seq dataset for histone modifications in CD4+ T-Cells from K. Zhao group, published in two sets:

  1. Methylations: http://www.cell.com/abstract/S0092-8674%2807%2900600-9
  2. Acetylations: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2769248/

For transcription factor ChIP-seq I recommend having a look at the ReMap project: http://tagc.univ-mrs.fr/remap/ 

 

 

ADD COMMENTlink modified 4.4 years ago • written 4.4 years ago by Saulius Lukauskas530

Many thanks Saulius that's exactly what I wanted, thanks again.

Cheers

ADD REPLYlink written 4.4 years ago by Zakaria Benmounah50
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