Question: rnahybrid start stop position
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gravatar for nathanielsaxe
5.8 years ago by
United Kingdom
nathanielsaxe10 wrote:

Does anyone what the rnahybrid position means? I've been running some predictions and all it outputs is a "position". On the ones that I've looked at, it seems to be the 5' position of the target but is this always the case?

thanks

Output i get: 

mfe: -27.6 kcal/mol
p-value: 1.000000e+00

Position: 178
target 5'  U        U         C  3'
            CUCGGUAA AUGUUGUGA     
            GAGUCAUU UACGACACU     
miRNA  3' CC        U         AU 5'
rnahybrid • 1.2k views
ADD COMMENTlink written 5.8 years ago by nathanielsaxe10
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