How is computed Mean Coverage from Illumina MiseqReporter ?
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9.1 years ago
ZheFrench ▴ 570

We are doing targeted DNA Sequencing on Miseq sequencer.

MiseqReporter let us export a file with Mean Coverage value for each targeted region. I' d like to know how this value is obtained? If someone has already used this kind of data, thanks for helping me!

Is this the sum of the reads at each position in the region averaged by the length of the region?

sequencing • 1.3k views
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