Question

Conservation score calculation for gene sequences

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9.0 years ago

muvinika ▴ 10

Please suggest me some tools to calculate Conservation scores. Can we do it bu using Bioedit?

snp gene sequence • 3.0k views

ADD COMMENT • link updated 7.3 years ago by Alex Reynolds 35k • written 9.0 years ago by muvinika ▴ 10

score 0 · Answer 1 · 2016-12-15

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7.3 years ago

hns ▴ 150

Not sure about your workflow. But one good score is CADD

Thank you

ADD COMMENT • link 7.3 years ago by hns ▴ 150

score 0 · Answer 2 · 2016-12-15

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7.3 years ago

Alex Reynolds 35k

PHAST offers phastCons and phyloP methods.

ADD COMMENT • link 7.3 years ago by Alex Reynolds 35k