Question

Conservation score calculation for gene sequences

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10.2 years ago

muvinika ▴ 10

Please suggest me some tools to calculate Conservation scores. Can we do it bu using Bioedit?

snp gene sequence • 3.2k views

ADD COMMENT • link updated 8.5 years ago by Alex Reynolds 36k • written 10.2 years ago by muvinika ▴ 10

score 0 · Answer 1 · 2016-12-15

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8.5 years ago

hns ▴ 150

Not sure about your workflow. But one good score is CADD

Thank you

ADD COMMENT • link 8.5 years ago by hns ▴ 150

score 0 · Answer 2 · 2016-12-15

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8.5 years ago

Alex Reynolds 36k

PHAST offers phastCons and phyloP methods.

ADD COMMENT • link 8.5 years ago by Alex Reynolds 36k