Off topic:How to use your own substitution matrix in BLAST?
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9.0 years ago
kevolinchen ▴ 30

I want to use BLAST to assess similarity of my own data (7 kinds of "amino acid" in my sequences).

So, I may need to design my own substitution matrices.

Did BLASTp support user defined substitution matrices? How?

blastp substitution-matrices BLAST • 2.6k views
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