Mass spectrometry and 'One hit wonders' dictionary with exclusive peptides for proteins in python
0
0
Entering edit mode
6.5 years ago
deb1500 • 0

Hi!

I have a list with the resulting peptides of hydrolysis using trypsin and i have another list with the ACs from uniprot, of each hydrolysed protein. I also have a dictionary with the ACs and the sequence of the proteins before the hydrolysis, how can i create a dictionary with python that the keys are the resulting peptide of hydrolysis and the values are the ACs of each proteins that  has given rise to the resulting peptide.

Something like:

peptides=['KHKJS KHGSK KSJS', 'KSHO JSKS',..]

ACs=['P78499', 'Q84939', ...]

d={'KHKJS':['P73093','Q84903',..]}

 

hydrolysis dictionary proteins one_hit_wonders • 1.7k views
ADD COMMENT

Login before adding your answer.

Traffic: 1786 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6