I'm trying to make a protein blast database that it give me an error due to duplicate sequences; I removed duplicate sequences with Dedupe tool (http://sourceforge.net/projects/bbmap/). But I still got the same error : "BLAST Database creation error: Error: Duplicate seq_ids are found:
I have also checked the fasta protein sequences for the blank lines, but there was no blank line. Could you please help me what is wrong here?
Thanks so much