Question: CNV calling and analysis from Affymetrix Axiom 50K SNP chip
0
gravatar for akang
3.7 years ago by
akang90
akang90 wrote:

I just got 50K SNPchip data from Affymetrix . I want to perform CNV analysis with it but can't figure out a way for CNV calling. I've been trying to use PennCNV and it says there has to be a lib folder along with the CEL folder. But there isn't any such folder with my data. How do I go about it? Is there another way of doing it?TIA

penncnv cnv snp • 1.2k views
ADD COMMENTlink modified 2.7 years ago by Ncemami10 • written 3.7 years ago by akang90
0
gravatar for Ncemami
2.7 years ago by
Ncemami10
CA
Ncemami10 wrote:

You may be able to download lib files from this page: http://www.affymetrix.com/support/technical/libraryfilesmain.affx

ADD COMMENTlink written 2.7 years ago by Ncemami10
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