I have 2 questions. I am very new in bioinformatics field. I am working on NCI-60 Cancer cell lines to find out miRNA and their target mRNA with computational methods by Machine Learning.
For the miRNA expression profiling in this sample. there are ID_REF and value(normalized log2 expression) columns. Can I use this value as expression value of each miRNA?
Again for the same sample the mRNA profiling here gives many columns (ID_REF
, CHPPairs
, CHPPairUsed
, Value
, CHPDetection
and CHPDetectionPvalue
).
Which column can be used as the expression value of each mRNA (if possible)?
Besides, if you give short notes or reference about those headers (CHPPairs
, CHPPairUsed
, Value
, ...) it will be very helpful.
Thank you for reading :)
ah ! yes ! i found series matrix files and they gives a matrix like representation. thank you !!! :D