Question: Pathway analysis using protein content (weight%)
gravatar for robjohn70000
4.4 years ago by
robjohn70000120 wrote:


I'm new to proteomics. I wonder if it is possible to carry out pathway analysis on protein content (weight%) data from proteomics experiments. I have a list of genes and their corresponding protein content (weight%) for a number of conditions(control and test). I'm actually interested in the differential expression of test/control, supported by P-value, so that I can determine significantly perturbed pathways. Would normalization and ranking be useful? Which tools in R maybe useful for the pathway analysis? Can anyone suggest the correct approach for doing this analysis.

mass spectrometry proteomics • 1.2k views
ADD COMMENTlink modified 10 months ago by Biostar ♦♦ 20 • written 4.4 years ago by robjohn70000120
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